Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
BMP4P12644 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
BMP4P12644 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
BMP4P12644 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.92□□□□□ -0.18
BMP4P12644 AC092580.3-201ENST00000430932 139 ntBASIC13.92□□□□□ -0.18
BMP4P12644 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
BMP4P12644 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 AC105021.1-202ENST00000570572 669 ntBASIC13.92□□□□□ -0.18
BMP4P12644 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.92□□□□□ -0.18
BMP4P12644 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.92□□□□□ -0.18
BMP4P12644 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.92□□□□□ -0.18
BMP4P12644 AC239800.4-201ENST00000603712 296 ntBASIC13.92□□□□□ -0.18
BMP4P12644 AL138828.2-201ENST00000615812 383 ntBASIC13.92□□□□□ -0.18
BMP4P12644 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
BMP4P12644 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.92□□□□□ -0.18
BMP4P12644 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
BMP4P12644 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.92□□□□□ -0.18
BMP4P12644 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.92□□□□□ -0.18
BMP4P12644 AP001282.1-201ENST00000531301 1499 ntBASIC13.92□□□□□ -0.18
BMP4P12644 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.92□□□□□ -0.18
BMP4P12644 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
BMP4P12644 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.91□□□□□ -0.18
BMP4P12644 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.91□□□□□ -0.18
BMP4P12644 AC087499.5-201ENST00000452760 1342 ntBASIC13.91□□□□□ -0.18
BMP4P12644 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
BMP4P12644 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.91□□□□□ -0.18
BMP4P12644 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.91□□□□□ -0.18
BMP4P12644 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.91□□□□□ -0.18
BMP4P12644 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
BMP4P12644 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.91□□□□□ -0.18
BMP4P12644 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.91□□□□□ -0.18
BMP4P12644 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
BMP4P12644 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.91□□□□□ -0.18
BMP4P12644 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
BMP4P12644 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 PIN1P1-201ENST00000412108 996 ntBASIC13.91□□□□□ -0.18
BMP4P12644 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.91□□□□□ -0.18
BMP4P12644 AC093724.1-201ENST00000448659 1027 ntBASIC13.91□□□□□ -0.18
BMP4P12644 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.91□□□□□ -0.18
BMP4P12644 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.91□□□□□ -0.18
BMP4P12644 AC004890.2-204ENST00000481968 304 ntBASIC13.91□□□□□ -0.18
BMP4P12644 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.91□□□□□ -0.18
BMP4P12644 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.91□□□□□ -0.18
BMP4P12644 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.91□□□□□ -0.18
BMP4P12644 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.91□□□□□ -0.18
BMP4P12644 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.91□□□□□ -0.18
BMP4P12644 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 SPDYE12P-201ENST00000618416 771 ntBASIC13.91□□□□□ -0.18
BMP4P12644 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
BMP4P12644 AP003400.6-201ENST00000624698 740 ntBASIC13.91□□□□□ -0.18
BMP4P12644 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
BMP4P12644 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.91□□□□□ -0.18
BMP4P12644 AC083964.2-201ENST00000623988 2396 ntBASIC13.91□□□□□ -0.18
BMP4P12644 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
BMP4P12644 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
BMP4P12644 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
BMP4P12644 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.91□□□□□ -0.18
BMP4P12644 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
BMP4P12644 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.91□□□□□ -0.18
BMP4P12644 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
BMP4P12644 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BMP4P12644 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms