Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SRGAP2CP0DJJ0 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.53■□□□□ 0.24
SRGAP2CP0DJJ0 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SRGAP2CP0DJJ0 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.53■□□□□ 0.24
SRGAP2CP0DJJ0 AC104982.3-201ENST00000581995 514 ntBASIC16.53■□□□□ 0.24
SRGAP2CP0DJJ0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.53■□□□□ 0.24
SRGAP2CP0DJJ0 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.53■□□□□ 0.24
SRGAP2CP0DJJ0 AC243960.2-201ENST00000600996 747 ntBASIC16.53■□□□□ 0.24
SRGAP2CP0DJJ0 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.53■□□□□ 0.24
SRGAP2CP0DJJ0 AL096828.3-201ENST00000615354 462 ntBASIC16.53■□□□□ 0.24
SRGAP2CP0DJJ0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRGAP2CP0DJJ0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRGAP2CP0DJJ0 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRGAP2CP0DJJ0 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SRGAP2CP0DJJ0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SRGAP2CP0DJJ0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRGAP2CP0DJJ0 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRGAP2CP0DJJ0 AP000593.2-201ENST00000542775 1433 ntBASIC16.53■□□□□ 0.24
SRGAP2CP0DJJ0 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.53■□□□□ 0.24
SRGAP2CP0DJJ0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.53■□□□□ 0.24
SRGAP2CP0DJJ0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 AC009093.2-202ENST00000620513 2079 ntBASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 HIST2H2BB-201ENST00000449108 381 ntBASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 AC244157.2-201ENST00000616239 1006 ntBASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.52■□□□□ 0.24
SRGAP2CP0DJJ0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRGAP2CP0DJJ0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRGAP2CP0DJJ0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRGAP2CP0DJJ0 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRGAP2CP0DJJ0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRGAP2CP0DJJ0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SRGAP2CP0DJJ0 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRGAP2CP0DJJ0 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
SRGAP2CP0DJJ0 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SRGAP2CP0DJJ0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRGAP2CP0DJJ0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.52■□□□□ 0.23
SRGAP2CP0DJJ0 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRGAP2CP0DJJ0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
SRGAP2CP0DJJ0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.52■□□□□ 0.23
SRGAP2CP0DJJ0 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRGAP2CP0DJJ0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 RN7SKP175-201ENST00000408472 289 ntBASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 AC079178.1-201ENST00000420915 656 ntBASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 AC022494.1-201ENST00000466044 728 ntBASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 AC100850.1-201ENST00000506768 649 ntBASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 AC138696.2-201ENST00000607376 223 ntBASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 AC005695.3-201ENST00000614522 232 ntBASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 AP001002.3-201ENST00000623482 206 ntBASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRGAP2CP0DJJ0 ACE3P-201ENST00000423435 1973 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms