Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.87□□□□□ -0.03
RBP1P09455 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.87□□□□□ -0.03
RBP1P09455 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.87□□□□□ -0.03
RBP1P09455 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBP1P09455 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RBP1P09455 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RBP1P09455 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBP1P09455 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBP1P09455 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RBP1P09455 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
RBP1P09455 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBP1P09455 LINC01230-201ENST00000625222 3017 ntBASIC14.87□□□□□ -0.03
RBP1P09455 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBP1P09455 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.87□□□□□ -0.03
RBP1P09455 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBP1P09455 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBP1P09455 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RBP1P09455 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RBP1P09455 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.86□□□□□ -0.03
RBP1P09455 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.86□□□□□ -0.03
RBP1P09455 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RBP1P09455 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.86□□□□□ -0.03
RBP1P09455 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.86□□□□□ -0.03
RBP1P09455 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RBP1P09455 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.86□□□□□ -0.03
RBP1P09455 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.86□□□□□ -0.03
RBP1P09455 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RBP1P09455 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.86□□□□□ -0.03
RBP1P09455 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 TPRX2P-201ENST00000535362 881 ntBASIC14.86□□□□□ -0.03
RBP1P09455 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.86□□□□□ -0.03
RBP1P09455 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.86□□□□□ -0.03
RBP1P09455 RRP7BP-205ENST00000566851 833 ntBASIC14.86□□□□□ -0.03
RBP1P09455 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.86□□□□□ -0.03
RBP1P09455 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.86□□□□□ -0.03
RBP1P09455 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.86□□□□□ -0.03
RBP1P09455 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.86□□□□□ -0.03
RBP1P09455 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.86□□□□□ -0.03
RBP1P09455 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RBP1P09455 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.86□□□□□ -0.03
RBP1P09455 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.86□□□□□ -0.03
RBP1P09455 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBP1P09455 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RBP1P09455 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.85□□□□□ -0.03
RBP1P09455 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RBP1P09455 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.85□□□□□ -0.03
RBP1P09455 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.85□□□□□ -0.03
RBP1P09455 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBP1P09455 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.85□□□□□ -0.03
RBP1P09455 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBP1P09455 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RBP1P09455 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBP1P09455 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.85□□□□□ -0.03
RBP1P09455 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBP1P09455 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RBP1P09455 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBP1P09455 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBP1P09455 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.85□□□□□ -0.03
RBP1P09455 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RBP1P09455 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBP1P09455 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RBP1P09455 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBP1P09455 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBP1P09455 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBP1P09455 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RBP1P09455 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RBP1P09455 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBP1P09455 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RBP1P09455 AL512638.1-201ENST00000457493 794 ntBASIC14.85□□□□□ -0.03
RBP1P09455 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBP1P09455 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.85□□□□□ -0.03
RBP1P09455 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RBP1P09455 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.85□□□□□ -0.03
RBP1P09455 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.85□□□□□ -0.03
RBP1P09455 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.85□□□□□ -0.03
RBP1P09455 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.85□□□□□ -0.03
RBP1P09455 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RBP1P09455 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms