Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
CD48P09326 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
CD48P09326 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 PCDHA3-202ENST00000532566 4594 ntBASIC15.57■□□□□ 0.08
CD48P09326 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.57■□□□□ 0.08
CD48P09326 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 FO681548.1-201ENST00000455617 1132 ntBASIC15.57■□□□□ 0.08
CD48P09326 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CD48P09326 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.57■□□□□ 0.08
CD48P09326 MIR5189-201ENST00000577370 114 ntBASIC15.57■□□□□ 0.08
CD48P09326 AC010319.3-201ENST00000597028 470 ntBASIC15.57■□□□□ 0.08
CD48P09326 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.57■□□□□ 0.08
CD48P09326 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CD48P09326 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CD48P09326 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.57■□□□□ 0.08
CD48P09326 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.57■□□□□ 0.08
CD48P09326 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD48P09326 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.57■□□□□ 0.08
CD48P09326 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.57■□□□□ 0.08
CD48P09326 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CD48P09326 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.56■□□□□ 0.08
CD48P09326 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD48P09326 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD48P09326 AC027601.5-201ENST00000624065 2482 ntBASIC15.56■□□□□ 0.08
CD48P09326 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CD48P09326 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.56■□□□□ 0.08
CD48P09326 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD48P09326 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD48P09326 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD48P09326 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.56■□□□□ 0.08
CD48P09326 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.56■□□□□ 0.08
CD48P09326 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CD48P09326 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD48P09326 KRT18P25-201ENST00000508931 1278 ntBASIC15.56■□□□□ 0.08
CD48P09326 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.56■□□□□ 0.08
CD48P09326 AC092364.2-202ENST00000597012 1073 ntBASIC15.56■□□□□ 0.08
CD48P09326 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CD48P09326 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD48P09326 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CD48P09326 AC003102.2-201ENST00000589195 1469 ntBASIC15.56■□□□□ 0.08
CD48P09326 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD48P09326 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD48P09326 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.56■□□□□ 0.08
CD48P09326 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.56■□□□□ 0.08
CD48P09326 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CD48P09326 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD48P09326 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CD48P09326 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CD48P09326 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.56■□□□□ 0.08
CD48P09326 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD48P09326 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD48P09326 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD48P09326 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD48P09326 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CD48P09326 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CD48P09326 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.55■□□□□ 0.08
CD48P09326 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
CD48P09326 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CD48P09326 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CD48P09326 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CD48P09326 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms