Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 AC079328.1-201ENST00000560358 952 ntBASIC18.24■□□□□ 0.51
CSF1RP07333 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC18.24■□□□□ 0.51
CSF1RP07333 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC18.24■□□□□ 0.51
CSF1RP07333 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC18.24■□□□□ 0.51
CSF1RP07333 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC18.24■□□□□ 0.51
CSF1RP07333 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CSF1RP07333 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CSF1RP07333 AL353770.1-201ENST00000614915 403 ntBASIC18.24■□□□□ 0.51
CSF1RP07333 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1RP07333 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1RP07333 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.24■□□□□ 0.51
CSF1RP07333 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1RP07333 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1RP07333 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1RP07333 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
CSF1RP07333 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1RP07333 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1RP07333 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CSF1RP07333 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1RP07333 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1RP07333 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1RP07333 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1RP07333 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1RP07333 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1RP07333 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1RP07333 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1RP07333 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1RP07333 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CSF1RP07333 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1RP07333 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CSF1RP07333 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1RP07333 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.23■□□□□ 0.51
CSF1RP07333 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1RP07333 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1RP07333 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CSF1RP07333 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.23■□□□□ 0.51
CSF1RP07333 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CSF1RP07333 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC18.23■□□□□ 0.51
CSF1RP07333 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1RP07333 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1RP07333 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC18.23■□□□□ 0.51
CSF1RP07333 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CSF1RP07333 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1RP07333 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC18.23■□□□□ 0.51
CSF1RP07333 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1RP07333 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1RP07333 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC18.23■□□□□ 0.51
CSF1RP07333 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.23■□□□□ 0.51
CSF1RP07333 AC134698.3-201ENST00000523880 214 ntBASIC18.23■□□□□ 0.51
CSF1RP07333 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1RP07333 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC18.23■□□□□ 0.51
CSF1RP07333 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC18.23■□□□□ 0.51
CSF1RP07333 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC18.23■□□□□ 0.51
CSF1RP07333 FGFR3P5-201ENST00000564496 886 ntBASIC18.23■□□□□ 0.51
CSF1RP07333 AC020922.3-201ENST00000595064 547 ntBASIC18.23■□□□□ 0.51
CSF1RP07333 AL133499.1-201ENST00000596207 608 ntBASIC18.23■□□□□ 0.51
CSF1RP07333 NAP1L6-202ENST00000641404 1222 ntBASIC18.23■□□□□ 0.51
CSF1RP07333 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1RP07333 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1RP07333 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CSF1RP07333 AC104640.1-201ENST00000562617 2109 ntBASIC18.23■□□□□ 0.51
CSF1RP07333 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.23■□□□□ 0.51
CSF1RP07333 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC18.23■□□□□ 0.51
CSF1RP07333 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1RP07333 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CSF1RP07333 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1RP07333 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1RP07333 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.23■□□□□ 0.51
CSF1RP07333 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1RP07333 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC18.23■□□□□ 0.51
CSF1RP07333 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.22■□□□□ 0.51
CSF1RP07333 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.22■□□□□ 0.51
CSF1RP07333 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CSF1RP07333 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CSF1RP07333 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.22■□□□□ 0.51
CSF1RP07333 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CSF1RP07333 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CSF1RP07333 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CSF1RP07333 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CSF1RP07333 MVK-214ENST00000629016 1591 ntTSL 5 BASIC18.22■□□□□ 0.51
CSF1RP07333 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSF1RP07333 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CSF1RP07333 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSF1RP07333 KRT8P21-201ENST00000430398 1491 ntBASIC18.22■□□□□ 0.51
CSF1RP07333 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.22■□□□□ 0.51
CSF1RP07333 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CSF1RP07333 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSF1RP07333 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC18.22■□□□□ 0.51
CSF1RP07333 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.22■□□□□ 0.51
CSF1RP07333 AC239868.1-201ENST00000369385 493 ntBASIC18.22■□□□□ 0.51
CSF1RP07333 PARVG-202ENST00000415224 999 ntTSL 2 BASIC18.22■□□□□ 0.51
CSF1RP07333 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC18.22■□□□□ 0.51
CSF1RP07333 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC18.22■□□□□ 0.51
CSF1RP07333 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC18.22■□□□□ 0.51
CSF1RP07333 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC18.22■□□□□ 0.51
CSF1RP07333 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC18.22■□□□□ 0.51
CSF1RP07333 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC18.22■□□□□ 0.51
CSF1RP07333 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC18.22■□□□□ 0.51
CSF1RP07333 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.22■□□□□ 0.51
CSF1RP07333 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms