Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.43■□□□□ 0.06
MT-ND3P03897 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 AC138969.3-201ENST00000546612 1459 ntBASIC15.43■□□□□ 0.06
MT-ND3P03897 AC138932.2-201ENST00000548268 1459 ntBASIC15.43■□□□□ 0.06
MT-ND3P03897 AC126755.4-201ENST00000549796 1459 ntBASIC15.43■□□□□ 0.06
MT-ND3P03897 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
MT-ND3P03897 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.43■□□□□ 0.06
MT-ND3P03897 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
MT-ND3P03897 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
MT-ND3P03897 AP001267.2-201ENST00000532619 2086 ntBASIC15.43■□□□□ 0.06
MT-ND3P03897 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.43■□□□□ 0.06
MT-ND3P03897 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
MT-ND3P03897 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.43■□□□□ 0.06
MT-ND3P03897 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
MT-ND3P03897 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.43■□□□□ 0.06
MT-ND3P03897 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
MT-ND3P03897 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.42■□□□□ 0.06
MT-ND3P03897 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.42■□□□□ 0.06
MT-ND3P03897 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.42■□□□□ 0.06
MT-ND3P03897 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.42■□□□□ 0.06
MT-ND3P03897 KRT8P12-202ENST00000472924 1397 ntBASIC15.42■□□□□ 0.06
MT-ND3P03897 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
MT-ND3P03897 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
MT-ND3P03897 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
MT-ND3P03897 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.42■□□□□ 0.06
MT-ND3P03897 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.42■□□□□ 0.06
MT-ND3P03897 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.42■□□□□ 0.06
MT-ND3P03897 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
MT-ND3P03897 SPTLC1P1-201ENST00000447199 261 ntBASIC15.42■□□□□ 0.06
MT-ND3P03897 RN7SL618P-201ENST00000477850 296 ntBASIC15.42■□□□□ 0.06
MT-ND3P03897 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.42■□□□□ 0.06
MT-ND3P03897 SLED1-202ENST00000512051 380 ntBASIC15.42■□□□□ 0.06
MT-ND3P03897 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
MT-ND3P03897 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.42■□□□□ 0.06
MT-ND3P03897 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.42■□□□□ 0.06
MT-ND3P03897 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 AL133215.2-201ENST00000609242 977 ntBASIC15.42■□□□□ 0.06
MT-ND3P03897 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.42■□□□□ 0.06
MT-ND3P03897 AC025048.6-201ENST00000634326 1161 ntBASIC15.42■□□□□ 0.06
MT-ND3P03897 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
MT-ND3P03897 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.42■□□□□ 0.06
MT-ND3P03897 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
MT-ND3P03897 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.42■□□□□ 0.06
MT-ND3P03897 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
MT-ND3P03897 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.42■□□□□ 0.06
MT-ND3P03897 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
MT-ND3P03897 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MT-ND3P03897 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.41■□□□□ 0.06
MT-ND3P03897 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND3P03897 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.41■□□□□ 0.06
MT-ND3P03897 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
MT-ND3P03897 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND3P03897 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND3P03897 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND3P03897 AC007787.1-201ENST00000588095 1583 ntBASIC15.41■□□□□ 0.06
MT-ND3P03897 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MT-ND3P03897 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.41■□□□□ 0.06
MT-ND3P03897 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MT-ND3P03897 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND3P03897 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND3P03897 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND3P03897 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.41■□□□□ 0.06
MT-ND3P03897 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.41■□□□□ 0.06
MT-ND3P03897 AL928921.2-201ENST00000641325 2442 ntBASIC15.41■□□□□ 0.06
MT-ND3P03897 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
MT-ND3P03897 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND3P03897 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
MT-ND3P03897 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND3P03897 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND3P03897 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms