Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GGPS1O95749 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
GGPS1O95749 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
GGPS1O95749 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GGPS1O95749 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.83■□□□□ 0.28
GGPS1O95749 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
GGPS1O95749 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GGPS1O95749 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
GGPS1O95749 AC016700.1-201ENST00000429424 312 ntBASIC16.83■□□□□ 0.28
GGPS1O95749 MROH4P-201ENST00000431302 1578 ntBASIC16.83■□□□□ 0.28
GGPS1O95749 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.83■□□□□ 0.28
GGPS1O95749 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.83■□□□□ 0.28
GGPS1O95749 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.83■□□□□ 0.28
GGPS1O95749 RNMTL1P1-201ENST00000454103 560 ntBASIC16.83■□□□□ 0.28
GGPS1O95749 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GGPS1O95749 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.83■□□□□ 0.28
GGPS1O95749 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GGPS1O95749 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.83■□□□□ 0.28
GGPS1O95749 MIR4783-201ENST00000580343 82 ntBASIC16.83■□□□□ 0.28
GGPS1O95749 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.83■□□□□ 0.28
GGPS1O95749 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
GGPS1O95749 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GGPS1O95749 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GGPS1O95749 AC138649.2-201ENST00000615886 705 ntBASIC16.83■□□□□ 0.28
GGPS1O95749 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.83■□□□□ 0.28
GGPS1O95749 AC022748.3-201ENST00000621828 275 ntBASIC16.83■□□□□ 0.28
GGPS1O95749 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.83■□□□□ 0.28
GGPS1O95749 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GGPS1O95749 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GGPS1O95749 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
GGPS1O95749 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GGPS1O95749 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
GGPS1O95749 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GGPS1O95749 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GGPS1O95749 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.82■□□□□ 0.28
GGPS1O95749 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GGPS1O95749 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GGPS1O95749 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GGPS1O95749 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
GGPS1O95749 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.82■□□□□ 0.28
GGPS1O95749 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GGPS1O95749 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GGPS1O95749 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GGPS1O95749 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GGPS1O95749 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.82■□□□□ 0.28
GGPS1O95749 NDUFV2P1-201ENST00000596415 907 ntBASIC16.82■□□□□ 0.28
GGPS1O95749 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.82■□□□□ 0.28
GGPS1O95749 AC084346.2-201ENST00000607097 949 ntBASIC16.82■□□□□ 0.28
GGPS1O95749 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GGPS1O95749 AL023803.2-201ENST00000620080 638 ntBASIC16.82■□□□□ 0.28
GGPS1O95749 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
GGPS1O95749 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GGPS1O95749 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GGPS1O95749 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GGPS1O95749 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GGPS1O95749 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GGPS1O95749 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GGPS1O95749 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
GGPS1O95749 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GGPS1O95749 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GGPS1O95749 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GGPS1O95749 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GGPS1O95749 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GGPS1O95749 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GGPS1O95749 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GGPS1O95749 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GGPS1O95749 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GGPS1O95749 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GGPS1O95749 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GGPS1O95749 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GGPS1O95749 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GGPS1O95749 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GGPS1O95749 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GGPS1O95749 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GGPS1O95749 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GGPS1O95749 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GGPS1O95749 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.81■□□□□ 0.28
GGPS1O95749 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GGPS1O95749 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.81■□□□□ 0.28
GGPS1O95749 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.81■□□□□ 0.28
GGPS1O95749 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.81■□□□□ 0.28
GGPS1O95749 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.81■□□□□ 0.28
GGPS1O95749 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.81■□□□□ 0.28
GGPS1O95749 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.81■□□□□ 0.28
GGPS1O95749 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GGPS1O95749 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.81■□□□□ 0.28
GGPS1O95749 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GGPS1O95749 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
GGPS1O95749 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GGPS1O95749 AC009955.4-201ENST00000597192 544 ntBASIC16.81■□□□□ 0.28
GGPS1O95749 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.81■□□□□ 0.28
GGPS1O95749 AL162426.1-201ENST00000624141 743 ntBASIC16.81■□□□□ 0.28
GGPS1O95749 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.81■□□□□ 0.28
GGPS1O95749 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GGPS1O95749 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GGPS1O95749 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GGPS1O95749 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GGPS1O95749 SHC1P1-201ENST00000425230 1745 ntBASIC16.81■□□□□ 0.28
GGPS1O95749 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GGPS1O95749 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 225.5 ms