Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.63■□□□□ 0.25
LGR5O75473 IMP3P2-201ENST00000489760 475 ntBASIC16.63■□□□□ 0.25
LGR5O75473 AC245884.6-201ENST00000515672 1067 ntBASIC16.63■□□□□ 0.25
LGR5O75473 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.63■□□□□ 0.25
LGR5O75473 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.63■□□□□ 0.25
LGR5O75473 AC132192.2-201ENST00000596206 1147 ntBASIC16.63■□□□□ 0.25
LGR5O75473 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
LGR5O75473 AC097724.1-201ENST00000609581 426 ntBASIC16.63■□□□□ 0.25
LGR5O75473 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.63■□□□□ 0.25
LGR5O75473 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LGR5O75473 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.63■□□□□ 0.25
LGR5O75473 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LGR5O75473 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LGR5O75473 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LGR5O75473 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LGR5O75473 AC105917.1-201ENST00000506637 2539 ntBASIC16.63■□□□□ 0.25
LGR5O75473 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.63■□□□□ 0.25
LGR5O75473 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LGR5O75473 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LGR5O75473 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LGR5O75473 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LGR5O75473 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LGR5O75473 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LGR5O75473 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LGR5O75473 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LGR5O75473 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LGR5O75473 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.62■□□□□ 0.25
LGR5O75473 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.62■□□□□ 0.25
LGR5O75473 AC022532.1-201ENST00000624563 1728 ntBASIC16.62■□□□□ 0.25
LGR5O75473 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.62■□□□□ 0.25
LGR5O75473 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.62■□□□□ 0.25
LGR5O75473 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LGR5O75473 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LGR5O75473 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.62■□□□□ 0.25
LGR5O75473 AL133466.1-201ENST00000447582 150 ntBASIC16.62■□□□□ 0.25
LGR5O75473 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.62■□□□□ 0.25
LGR5O75473 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.62■□□□□ 0.25
LGR5O75473 GCOM2-201ENST00000509133 1104 ntBASIC16.62■□□□□ 0.25
LGR5O75473 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.62■□□□□ 0.25
LGR5O75473 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.62■□□□□ 0.25
LGR5O75473 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.62■□□□□ 0.25
LGR5O75473 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.62■□□□□ 0.25
LGR5O75473 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.62■□□□□ 0.25
LGR5O75473 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.62■□□□□ 0.25
LGR5O75473 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.62■□□□□ 0.25
LGR5O75473 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.62■□□□□ 0.25
LGR5O75473 AP001505.2-201ENST00000616815 443 ntBASIC16.62■□□□□ 0.25
LGR5O75473 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.62■□□□□ 0.25
LGR5O75473 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.62■□□□□ 0.25
LGR5O75473 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.62■□□□□ 0.25
LGR5O75473 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.62■□□□□ 0.25
LGR5O75473 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LGR5O75473 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LGR5O75473 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LGR5O75473 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LGR5O75473 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LGR5O75473 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LGR5O75473 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LGR5O75473 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LGR5O75473 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LGR5O75473 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LGR5O75473 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LGR5O75473 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LGR5O75473 ZBED1P1-201ENST00000502364 1930 ntBASIC16.61■□□□□ 0.25
LGR5O75473 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.61■□□□□ 0.25
LGR5O75473 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LGR5O75473 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LGR5O75473 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LGR5O75473 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LGR5O75473 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LGR5O75473 AC091046.1-201ENST00000331871 207 ntBASIC16.61■□□□□ 0.25
LGR5O75473 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LGR5O75473 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.61■□□□□ 0.25
LGR5O75473 HINT2P1-201ENST00000419438 481 ntBASIC16.61■□□□□ 0.25
LGR5O75473 AL008707.1-201ENST00000422498 534 ntBASIC16.61■□□□□ 0.25
LGR5O75473 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LGR5O75473 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LGR5O75473 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms