Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.16□□□□□ -0.14
HCN1O60741 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
HCN1O60741 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.16□□□□□ -0.14
HCN1O60741 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
HCN1O60741 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.16□□□□□ -0.14
HCN1O60741 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HCN1O60741 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HCN1O60741 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCN1O60741 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCN1O60741 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
HCN1O60741 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.15□□□□□ -0.14
HCN1O60741 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HCN1O60741 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.15□□□□□ -0.14
HCN1O60741 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCN1O60741 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
HCN1O60741 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.15□□□□□ -0.14
HCN1O60741 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCN1O60741 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.15□□□□□ -0.14
HCN1O60741 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HCN1O60741 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCN1O60741 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HCN1O60741 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HCN1O60741 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.15□□□□□ -0.14
HCN1O60741 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HCN1O60741 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.15□□□□□ -0.14
HCN1O60741 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCN1O60741 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCN1O60741 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
HCN1O60741 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCN1O60741 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HCN1O60741 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCN1O60741 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCN1O60741 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.15□□□□□ -0.14
HCN1O60741 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HCN1O60741 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.15□□□□□ -0.14
HCN1O60741 AL133267.1-201ENST00000398220 340 ntBASIC14.15□□□□□ -0.14
HCN1O60741 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.15□□□□□ -0.14
HCN1O60741 SOCS2P1-201ENST00000417727 557 ntBASIC14.15□□□□□ -0.14
HCN1O60741 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.15□□□□□ -0.14
HCN1O60741 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.15□□□□□ -0.14
HCN1O60741 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.15□□□□□ -0.14
HCN1O60741 IGHV3-71-201ENST00000523324 359 ntBASIC14.15□□□□□ -0.14
HCN1O60741 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.15□□□□□ -0.14
HCN1O60741 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.15□□□□□ -0.14
HCN1O60741 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HCN1O60741 RAB43P1-201ENST00000561790 589 ntBASIC14.15□□□□□ -0.14
HCN1O60741 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
HCN1O60741 AC017083.2-201ENST00000608069 979 ntBASIC14.15□□□□□ -0.14
HCN1O60741 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.15□□□□□ -0.14
HCN1O60741 MIR6752-201ENST00000618442 71 ntBASIC14.15□□□□□ -0.14
HCN1O60741 CU634019.7-201ENST00000624153 1185 ntBASIC14.15□□□□□ -0.14
HCN1O60741 FP236241.2-201ENST00000624906 1185 ntBASIC14.15□□□□□ -0.14
HCN1O60741 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.15□□□□□ -0.14
HCN1O60741 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCN1O60741 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCN1O60741 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
HCN1O60741 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.15□□□□□ -0.14
HCN1O60741 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HCN1O60741 INTS4P2-202ENST00000614726 2019 ntBASIC14.15□□□□□ -0.14
HCN1O60741 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HCN1O60741 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HCN1O60741 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.15□□□□□ -0.14
HCN1O60741 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCN1O60741 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HCN1O60741 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCN1O60741 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.15□□□□□ -0.14
HCN1O60741 AL121723.1-201ENST00000445194 1519 ntBASIC14.15□□□□□ -0.14
HCN1O60741 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.15□□□□□ -0.14
HCN1O60741 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCN1O60741 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.15
HCN1O60741 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
HCN1O60741 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
HCN1O60741 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCN1O60741 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HCN1O60741 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HCN1O60741 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HCN1O60741 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCN1O60741 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HCN1O60741 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCN1O60741 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.14□□□□□ -0.15
HCN1O60741 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.14□□□□□ -0.15
HCN1O60741 FGD5P1-202ENST00000614866 2498 ntBASIC14.14□□□□□ -0.15
HCN1O60741 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HCN1O60741 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HCN1O60741 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HCN1O60741 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCN1O60741 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HCN1O60741 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms