Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACTN4O43707 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACTN4O43707 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACTN4O43707 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ACTN4O43707 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ACTN4O43707 AC007541.1-201ENST00000570282 1469 ntBASIC16.88■□□□□ 0.29
ACTN4O43707 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.88■□□□□ 0.29
ACTN4O43707 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ACTN4O43707 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ACTN4O43707 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACTN4O43707 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.88■□□□□ 0.29
ACTN4O43707 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ACTN4O43707 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACTN4O43707 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.88■□□□□ 0.29
ACTN4O43707 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.88■□□□□ 0.29
ACTN4O43707 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
ACTN4O43707 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.88■□□□□ 0.29
ACTN4O43707 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ACTN4O43707 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ACTN4O43707 ELK1P1-201ENST00000485699 580 ntBASIC16.88■□□□□ 0.29
ACTN4O43707 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACTN4O43707 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
ACTN4O43707 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.88■□□□□ 0.29
ACTN4O43707 API5-211ENST00000534695 560 ntTSL 5 BASIC16.88■□□□□ 0.29
ACTN4O43707 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACTN4O43707 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
ACTN4O43707 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.88■□□□□ 0.29
ACTN4O43707 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.88■□□□□ 0.29
ACTN4O43707 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACTN4O43707 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.88■□□□□ 0.29
ACTN4O43707 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.88■□□□□ 0.29
ACTN4O43707 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACTN4O43707 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.88■□□□□ 0.29
ACTN4O43707 AJ011932.1-201ENST00000621707 465 ntBASIC16.88■□□□□ 0.29
ACTN4O43707 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ACTN4O43707 AGGF1P1-201ENST00000509500 2073 ntBASIC16.88■□□□□ 0.29
ACTN4O43707 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACTN4O43707 AC136759.1-202ENST00000530858 2194 ntBASIC16.88■□□□□ 0.29
ACTN4O43707 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.88■□□□□ 0.29
ACTN4O43707 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ACTN4O43707 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.88■□□□□ 0.29
ACTN4O43707 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACTN4O43707 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.87■□□□□ 0.29
ACTN4O43707 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ACTN4O43707 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ACTN4O43707 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.87■□□□□ 0.29
ACTN4O43707 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ACTN4O43707 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ACTN4O43707 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
ACTN4O43707 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ACTN4O43707 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ACTN4O43707 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ACTN4O43707 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ACTN4O43707 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ACTN4O43707 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ACTN4O43707 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ACTN4O43707 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.87■□□□□ 0.29
ACTN4O43707 MIR770-201ENST00000390219 98 ntBASIC16.87■□□□□ 0.29
ACTN4O43707 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ACTN4O43707 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ACTN4O43707 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ACTN4O43707 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.87■□□□□ 0.29
ACTN4O43707 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.87■□□□□ 0.29
ACTN4O43707 MYCLP2-201ENST00000449268 967 ntBASIC16.87■□□□□ 0.29
ACTN4O43707 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
ACTN4O43707 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC16.87■□□□□ 0.29
ACTN4O43707 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.87■□□□□ 0.29
ACTN4O43707 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.87■□□□□ 0.29
ACTN4O43707 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.87■□□□□ 0.29
ACTN4O43707 AC027796.2-201ENST00000575326 344 ntBASIC16.87■□□□□ 0.29
ACTN4O43707 CLUHP6-201ENST00000580789 941 ntBASIC16.87■□□□□ 0.29
ACTN4O43707 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.87■□□□□ 0.29
ACTN4O43707 AC004466.1-201ENST00000599515 1080 ntBASIC16.87■□□□□ 0.29
ACTN4O43707 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.87■□□□□ 0.29
ACTN4O43707 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ACTN4O43707 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.87■□□□□ 0.29
ACTN4O43707 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ACTN4O43707 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ACTN4O43707 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.87■□□□□ 0.29
ACTN4O43707 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ACTN4O43707 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ACTN4O43707 AL391825.1-201ENST00000457671 1364 ntBASIC16.87■□□□□ 0.29
ACTN4O43707 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ACTN4O43707 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.87■□□□□ 0.29
ACTN4O43707 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.87■□□□□ 0.29
ACTN4O43707 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ACTN4O43707 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ACTN4O43707 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.87■□□□□ 0.29
ACTN4O43707 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
ACTN4O43707 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.86■□□□□ 0.29
ACTN4O43707 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.86■□□□□ 0.29
ACTN4O43707 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ACTN4O43707 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.86■□□□□ 0.29
ACTN4O43707 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ACTN4O43707 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.86■□□□□ 0.29
ACTN4O43707 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.86■□□□□ 0.29
ACTN4O43707 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ACTN4O43707 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.86■□□□□ 0.29
ACTN4O43707 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
ACTN4O43707 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms