Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
O00370 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
O00370 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
O00370 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
O00370 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.07■□□□□ 0.16
O00370 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
O00370 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
O00370 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.07■□□□□ 0.16
O00370 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.07■□□□□ 0.16
O00370 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
O00370 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.07■□□□□ 0.16
O00370 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
O00370 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.07■□□□□ 0.16
O00370 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
O00370 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
O00370 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
O00370 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
O00370 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
O00370 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
O00370 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
O00370 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.06■□□□□ 0.16
O00370 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.06■□□□□ 0.16
O00370 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
O00370 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
O00370 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
O00370 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
O00370 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
O00370 AC023090.2-201ENST00000625182 2110 ntBASIC16.06■□□□□ 0.16
O00370 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
O00370 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
O00370 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
O00370 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
O00370 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.06■□□□□ 0.16
O00370 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.06■□□□□ 0.16
O00370 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
O00370 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
O00370 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.06■□□□□ 0.16
O00370 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
O00370 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
O00370 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.06■□□□□ 0.16
O00370 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.06■□□□□ 0.16
O00370 AC005034.1-201ENST00000426657 489 ntBASIC16.06■□□□□ 0.16
O00370 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.06■□□□□ 0.16
O00370 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.06■□□□□ 0.16
O00370 AL355864.2-201ENST00000447420 863 ntBASIC16.06■□□□□ 0.16
O00370 BCRP2-202ENST00000447763 634 ntBASIC16.06■□□□□ 0.16
O00370 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
O00370 BCRP6-201ENST00000510112 632 ntBASIC16.06■□□□□ 0.16
O00370 BCRP7-201ENST00000511549 544 ntBASIC16.06■□□□□ 0.16
O00370 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
O00370 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
O00370 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.06■□□□□ 0.16
O00370 AL035252.4-201ENST00000624174 288 ntBASIC16.06■□□□□ 0.16
O00370 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.06■□□□□ 0.16
O00370 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.06■□□□□ 0.16
O00370 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
O00370 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
O00370 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
O00370 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
O00370 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
O00370 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
O00370 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
O00370 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.06■□□□□ 0.16
O00370 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.06■□□□□ 0.16
O00370 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.06■□□□□ 0.16
O00370 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
O00370 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
O00370 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
O00370 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
O00370 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
O00370 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
O00370 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
O00370 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.05■□□□□ 0.16
O00370 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
O00370 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
O00370 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
O00370 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
O00370 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
O00370 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
O00370 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
O00370 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.05■□□□□ 0.16
O00370 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
O00370 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
O00370 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
O00370 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
O00370 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.05■□□□□ 0.16
O00370 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.05■□□□□ 0.16
O00370 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.05■□□□□ 0.16
O00370 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
O00370 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
O00370 AC018665.1-201ENST00000622927 1362 ntBASIC16.05■□□□□ 0.16
O00370 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
O00370 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.05■□□□□ 0.16
O00370 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.05■□□□□ 0.16
O00370 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
O00370 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
O00370 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
O00370 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
O00370 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
O00370 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms