Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PDLIM1O00151 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PDLIM1O00151 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDLIM1O00151 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PDLIM1O00151 AC106818.1-201ENST00000623223 3242 ntBASIC14.45□□□□□ -0.1
PDLIM1O00151 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.45□□□□□ -0.1
PDLIM1O00151 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDLIM1O00151 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDLIM1O00151 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.45□□□□□ -0.1
PDLIM1O00151 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM1O00151 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PDLIM1O00151 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM1O00151 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM1O00151 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PDLIM1O00151 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM1O00151 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM1O00151 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM1O00151 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM1O00151 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PDLIM1O00151 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
PDLIM1O00151 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PDLIM1O00151 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.44□□□□□ -0.1
PDLIM1O00151 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.44□□□□□ -0.1
PDLIM1O00151 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.44□□□□□ -0.1
PDLIM1O00151 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PDLIM1O00151 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PDLIM1O00151 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PDLIM1O00151 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM1O00151 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PDLIM1O00151 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
PDLIM1O00151 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PDLIM1O00151 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.44□□□□□ -0.1
PDLIM1O00151 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.44□□□□□ -0.1
PDLIM1O00151 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.44□□□□□ -0.1
PDLIM1O00151 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.44□□□□□ -0.1
PDLIM1O00151 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.44□□□□□ -0.1
PDLIM1O00151 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM1O00151 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM1O00151 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.44□□□□□ -0.1
PDLIM1O00151 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.44□□□□□ -0.1
PDLIM1O00151 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM1O00151 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.44□□□□□ -0.1
PDLIM1O00151 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM1O00151 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM1O00151 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM1O00151 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM1O00151 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM1O00151 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM1O00151 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM1O00151 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PDLIM1O00151 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM1O00151 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM1O00151 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PDLIM1O00151 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PDLIM1O00151 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC14.44□□□□□ -0.1
PDLIM1O00151 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM1O00151 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM1O00151 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.43□□□□□ -0.1
PDLIM1O00151 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM1O00151 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM1O00151 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
PDLIM1O00151 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
PDLIM1O00151 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM1O00151 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PDLIM1O00151 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM1O00151 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM1O00151 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM1O00151 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM1O00151 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PDLIM1O00151 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM1O00151 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PDLIM1O00151 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
PDLIM1O00151 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM1O00151 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM1O00151 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM1O00151 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM1O00151 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.43□□□□□ -0.1
PDLIM1O00151 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM1O00151 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.43□□□□□ -0.1
PDLIM1O00151 METTL21AP1-201ENST00000438852 635 ntBASIC14.43□□□□□ -0.1
PDLIM1O00151 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM1O00151 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.43□□□□□ -0.1
PDLIM1O00151 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.43□□□□□ -0.1
PDLIM1O00151 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM1O00151 AC109322.1-201ENST00000524499 1264 ntBASIC14.43□□□□□ -0.1
PDLIM1O00151 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.43□□□□□ -0.1
PDLIM1O00151 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM1O00151 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PDLIM1O00151 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.43□□□□□ -0.1
PDLIM1O00151 AC011467.4-201ENST00000594891 528 ntBASIC14.43□□□□□ -0.1
PDLIM1O00151 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.43□□□□□ -0.1
PDLIM1O00151 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.43□□□□□ -0.1
PDLIM1O00151 SPTSSB-204ENST00000617024 1292 ntBASIC14.43□□□□□ -0.1
PDLIM1O00151 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM1O00151 AP001059.3-201ENST00000619053 235 ntBASIC14.43□□□□□ -0.1
PDLIM1O00151 LINC00628-201ENST00000628516 1289 ntBASIC14.43□□□□□ -0.1
PDLIM1O00151 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.43□□□□□ -0.1
PDLIM1O00151 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM1O00151 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.43□□□□□ -0.1
PDLIM1O00151 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms