Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 LINC00554-201ENST00000564841 3011 ntBASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 Z93015.1-201ENST00000451718 390 ntBASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 AC099548.2-209ENST00000480264 625 ntBASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 SAMD11P1-201ENST00000571429 661 ntBASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 AC244093.1-201ENST00000610837 814 ntBASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 PRSS30P-206ENST00000641773 873 ntBASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 AL645937.2-201ENST00000396808 931 ntBASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 RN7SL48P-201ENST00000579283 293 ntBASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 AL118558.3-201ENST00000607414 1079 ntBASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA3F8WFD2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 BTBD6P1-201ENST00000412176 1267 ntBASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms