Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 C2orf27AP3-201ENST00000434123 579 ntBASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 CSF2RBP1-201ENST00000447905 391 ntBASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 AC092658.1-201ENST00000505836 891 ntBASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 AL354718.3-201ENST00000616414 581 ntBASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 BX539320.1-201ENST00000623759 877 ntBASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 CR382287.1-201ENST00000623954 586 ntBASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 AC026748.1-201ENST00000624349 3251 ntBASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PTPDC1A2A3K4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PTPDC1A2A3K4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
PTPDC1A2A3K4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.71■□□□□ 0.42
PTPDC1A2A3K4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PTPDC1A2A3K4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
PTPDC1A2A3K4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PTPDC1A2A3K4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.71■□□□□ 0.42
PTPDC1A2A3K4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.71■□□□□ 0.42
PTPDC1A2A3K4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 INTS4P1-203ENST00000641008 3683 ntBASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 SNX18-202ENST00000343017 3140 ntBASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 AL645937.2-201ENST00000396808 931 ntBASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 KRT18P25-201ENST00000508931 1278 ntBASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 AP000812.2-201ENST00000538934 718 ntBASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 AP005019.2-201ENST00000615104 511 ntBASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 AC023090.2-201ENST00000625182 2110 ntBASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPDC1A2A3K4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPDC1A2A3K4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPDC1A2A3K4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPDC1A2A3K4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPDC1A2A3K4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPDC1A2A3K4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPDC1A2A3K4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PTPDC1A2A3K4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPDC1A2A3K4 AC139749.1-202ENST00000617529 3139 ntBASIC17.69■□□□□ 0.42
PTPDC1A2A3K4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPDC1A2A3K4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPDC1A2A3K4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PTPDC1A2A3K4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.69■□□□□ 0.42
PTPDC1A2A3K4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PTPDC1A2A3K4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PTPDC1A2A3K4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.69■□□□□ 0.42
PTPDC1A2A3K4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPDC1A2A3K4 FO681548.1-201ENST00000455617 1132 ntBASIC17.69■□□□□ 0.42
PTPDC1A2A3K4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPDC1A2A3K4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.69■□□□□ 0.42
PTPDC1A2A3K4 GNRHR2-203ENST00000581100 1187 ntBASIC17.69■□□□□ 0.42
PTPDC1A2A3K4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms