Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 AC117489.1-201ENST00000625169 3217 ntBASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 C1R-201ENST00000535233 2211 ntTSL 2 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 AC087499.6-201ENST00000411576 835 ntBASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 SAMD11P1-201ENST00000571429 661 ntBASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 AL132655.2-201ENST00000596276 594 ntBASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 AC091951.1-201ENST00000512854 2465 ntBASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 AGAP7P-201ENST00000582299 2062 ntBASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 AGAP14-201ENST00000624701 2060 ntBASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 CALY-202ENST00000368555 783 ntTSL 2 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 VDAC1P7-201ENST00000462417 847 ntBASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 GAPDHP40-201ENST00000505218 1006 ntBASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 AC026410.3-201ENST00000514280 936 ntBASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 FADS2-205ENST00000517839 469 ntTSL 3 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC11.41□□□□□ -0.58
HLA-DRB4X5D2U9 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms