Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 AL133267.1-201ENST00000398220 340 ntBASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 CNN2P11-201ENST00000429351 262 ntBASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 AL512356.2-201ENST00000546955 174 ntBASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 AC015910.1-201ENST00000579400 975 ntBASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 AC092135.3-201ENST00000624151 1846 ntBASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 Z97205.2-201ENST00000564697 1639 ntBASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 AC005562.1-201ENST00000583030 3219 ntBASIC14.7□□□□□ -0.06
PCDHGB4Q9UN71 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 KRT18P13-201ENST00000400056 1290 ntBASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 AC069262.1-201ENST00000539058 672 ntBASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB4Q9UN71 AL031595.1-201ENST00000623969 4709 ntBASIC14.68□□□□□ -0.06
PCDHGB4Q9UN71 PTENP1-202ENST00000532280 3996 ntBASIC14.68□□□□□ -0.06
PCDHGB4Q9UN71 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGB4Q9UN71 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGB4Q9UN71 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
PCDHGB4Q9UN71 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB4Q9UN71 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB4Q9UN71 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms