Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 SERPINA13P-202ENST00000478994 924 ntBASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 CYP4F23P-201ENST00000593402 1579 ntBASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 DPM3-202ENST00000368399 517 ntBASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 AC091804.1-201ENST00000486888 567 ntBASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 EMC4-209ENST00000559421 497 ntTSL 2 BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 AC104506.1-201ENST00000609247 429 ntBASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 AC007663.3-201ENST00000609632 465 ntBASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NPC1L1Q9UHC9 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 PTPA-218ENST00000435132 618 ntTSL 2 BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPC1L1Q9UHC9 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 AC064801.2-201ENST00000625052 1303 ntBASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 AL596257.1-201ENST00000641463 2694 ntBASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 WARS-203ENST00000358655 2466 ntTSL 2 BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 BRWD1P1-201ENST00000401091 371 ntBASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 ST13P19-201ENST00000442505 1124 ntBASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 AC104306.2-201ENST00000451877 341 ntBASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 PACS1-203ENST00000524815 628 ntTSL 4 BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 MIR4538-201ENST00000581377 78 ntBASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 AC009884.2-201ENST00000603110 324 ntBASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
NPC1L1Q9UHC9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms