Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC079178.1-201ENST00000420915 656 ntBASIC13.85□□□□□ -0.19
LRFN1Q9P244 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRFN1Q9P244 AL591846.1-201ENST00000451736 433 ntBASIC13.85□□□□□ -0.19
LRFN1Q9P244 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 AC026434.2-201ENST00000506094 1078 ntBASIC13.85□□□□□ -0.19
LRFN1Q9P244 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 ZACNP1-201ENST00000612259 710 ntBASIC13.85□□□□□ -0.19
LRFN1Q9P244 AC138466.3-201ENST00000619983 221 ntBASIC13.85□□□□□ -0.19
LRFN1Q9P244 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRFN1Q9P244 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRFN1Q9P244 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRFN1Q9P244 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRFN1Q9P244 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 CLUHP2-201ENST00000426660 1303 ntBASIC13.85□□□□□ -0.19
LRFN1Q9P244 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 OR2I1P-210ENST00000642037 4691 ntBASIC13.85□□□□□ -0.19
LRFN1Q9P244 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.85□□□□□ -0.19
LRFN1Q9P244 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.84□□□□□ -0.19
LRFN1Q9P244 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.84□□□□□ -0.19
LRFN1Q9P244 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
LRFN1Q9P244 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.84□□□□□ -0.19
LRFN1Q9P244 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.84□□□□□ -0.19
LRFN1Q9P244 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
LRFN1Q9P244 AC136621.1-201ENST00000624017 2304 ntBASIC13.84□□□□□ -0.19
LRFN1Q9P244 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
LRFN1Q9P244 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.84□□□□□ -0.19
LRFN1Q9P244 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
LRFN1Q9P244 MIR1247-201ENST00000408206 136 ntBASIC13.84□□□□□ -0.19
LRFN1Q9P244 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.84□□□□□ -0.19
LRFN1Q9P244 AC006033.1-201ENST00000440505 426 ntBASIC13.84□□□□□ -0.19
LRFN1Q9P244 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.84□□□□□ -0.19
LRFN1Q9P244 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 AC106820.3-201ENST00000561653 397 ntBASIC13.84□□□□□ -0.19
LRFN1Q9P244 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.84□□□□□ -0.19
LRFN1Q9P244 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.84□□□□□ -0.19
LRFN1Q9P244 AC104982.3-201ENST00000581995 514 ntBASIC13.84□□□□□ -0.19
LRFN1Q9P244 AC103810.3-201ENST00000583567 96 ntBASIC13.84□□□□□ -0.19
LRFN1Q9P244 AC004466.1-201ENST00000599515 1080 ntBASIC13.84□□□□□ -0.19
LRFN1Q9P244 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.84□□□□□ -0.19
LRFN1Q9P244 AC005695.3-201ENST00000614522 232 ntBASIC13.84□□□□□ -0.19
LRFN1Q9P244 AC244157.2-201ENST00000616239 1006 ntBASIC13.84□□□□□ -0.19
LRFN1Q9P244 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LRFN1Q9P244 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LRFN1Q9P244 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.84□□□□□ -0.19
LRFN1Q9P244 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.84□□□□□ -0.19
LRFN1Q9P244 KRT8P4-201ENST00000509735 1454 ntBASIC13.84□□□□□ -0.19
LRFN1Q9P244 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LRFN1Q9P244 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LRFN1Q9P244 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LRFN1Q9P244 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.84□□□□□ -0.19
LRFN1Q9P244 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRFN1Q9P244 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
LRFN1Q9P244 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LRFN1Q9P244 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
LRFN1Q9P244 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LRFN1Q9P244 TCAF2P1-201ENST00000291129 2421 ntBASIC13.83□□□□□ -0.19
LRFN1Q9P244 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRFN1Q9P244 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LRFN1Q9P244 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRFN1Q9P244 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms