Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 ZACNP1-201ENST00000612259 710 ntBASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 AC005695.3-201ENST00000614522 232 ntBASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 AL096828.3-201ENST00000615354 462 ntBASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 AP000593.2-201ENST00000542775 1433 ntBASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 CICP23-201ENST00000605013 2741 ntBASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
HMG20BQ9P0W2 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HMG20BQ9P0W2 AC009093.2-202ENST00000620513 2079 ntBASIC18.27■□□□□ 0.52
HMG20BQ9P0W2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HMG20BQ9P0W2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMG20BQ9P0W2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HMG20BQ9P0W2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMG20BQ9P0W2 AC020910.5-201ENST00000623668 1865 ntBASIC18.27■□□□□ 0.52
HMG20BQ9P0W2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HMG20BQ9P0W2 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.27■□□□□ 0.52
HMG20BQ9P0W2 AC004945.1-201ENST00000416738 983 ntBASIC18.27■□□□□ 0.52
HMG20BQ9P0W2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.27■□□□□ 0.52
HMG20BQ9P0W2 HIST2H2BB-201ENST00000449108 381 ntBASIC18.27■□□□□ 0.52
HMG20BQ9P0W2 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC18.27■□□□□ 0.52
HMG20BQ9P0W2 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
HMG20BQ9P0W2 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HMG20BQ9P0W2 MIR4683-201ENST00000579659 81 ntBASIC18.27■□□□□ 0.52
HMG20BQ9P0W2 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HMG20BQ9P0W2 AC138696.2-201ENST00000607376 223 ntBASIC18.27■□□□□ 0.52
HMG20BQ9P0W2 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HMG20BQ9P0W2 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.27■□□□□ 0.52
HMG20BQ9P0W2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HMG20BQ9P0W2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
HMG20BQ9P0W2 AC011840.2-201ENST00000563063 1520 ntBASIC18.27■□□□□ 0.51
HMG20BQ9P0W2 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HMG20BQ9P0W2 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HMG20BQ9P0W2 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
HMG20BQ9P0W2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
HMG20BQ9P0W2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HMG20BQ9P0W2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 AC011270.2-201ENST00000624293 2550 ntBASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 RN7SKP175-201ENST00000408472 289 ntBASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HMG20BQ9P0W2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMG20BQ9P0W2 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMG20BQ9P0W2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMG20BQ9P0W2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMG20BQ9P0W2 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC18.25■□□□□ 0.51
HMG20BQ9P0W2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.25■□□□□ 0.51
HMG20BQ9P0W2 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMG20BQ9P0W2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HMG20BQ9P0W2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMG20BQ9P0W2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.25■□□□□ 0.51
HMG20BQ9P0W2 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMG20BQ9P0W2 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMG20BQ9P0W2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMG20BQ9P0W2 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMG20BQ9P0W2 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HMG20BQ9P0W2 HSPB1P2-201ENST00000448722 546 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms