Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 AC018529.2-202ENST00000611482 3087 ntBASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 AC114501.2-201ENST00000439631 535 ntBASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 AC044860.1-202ENST00000559481 777 ntBASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 AC025181.2-201ENST00000606994 802 ntBASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 AC009118.2-201ENST00000613275 655 ntBASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 AL109936.8-201ENST00000641772 604 ntBASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.59□□□□□ -0.39
LIN7CQ9NUP9 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.58□□□□□ -0.39
LIN7CQ9NUP9 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
LIN7CQ9NUP9 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
LIN7CQ9NUP9 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 AC015922.1-201ENST00000421102 1152 ntBASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 HMGN1P19-201ENST00000436976 333 ntBASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 BCRP1-201ENST00000444246 691 ntBASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms