Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 AC007663.3-201ENST00000609632 465 ntBASIC15.61■□□□□ 0.09
HPS4Q9NQG7 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.61■□□□□ 0.09
HPS4Q9NQG7 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 AC055811.4-201ENST00000624039 1754 ntBASIC15.61■□□□□ 0.09
HPS4Q9NQG7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 CLUHP2-201ENST00000426660 1303 ntBASIC15.61■□□□□ 0.09
HPS4Q9NQG7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 CICP13-201ENST00000422015 2789 ntBASIC15.6■□□□□ 0.09
HPS4Q9NQG7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 RPL5P21-201ENST00000404620 815 ntBASIC15.6■□□□□ 0.09
HPS4Q9NQG7 NKAIN1P1-201ENST00000435754 582 ntBASIC15.6■□□□□ 0.09
HPS4Q9NQG7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 DUX4L47-201ENST00000566374 394 ntBASIC15.6■□□□□ 0.09
HPS4Q9NQG7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 AC106872.11-201ENST00000605838 421 ntBASIC15.6■□□□□ 0.09
HPS4Q9NQG7 AP001002.3-201ENST00000623482 206 ntBASIC15.6■□□□□ 0.09
HPS4Q9NQG7 AL603764.1-201ENST00000636452 321 ntBASIC15.6■□□□□ 0.09
HPS4Q9NQG7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
HPS4Q9NQG7 REXO1L5P-201ENST00000622260 2098 ntBASIC15.59■□□□□ 0.09
HPS4Q9NQG7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 AC100850.1-201ENST00000506768 649 ntBASIC15.59■□□□□ 0.09
HPS4Q9NQG7 AC044849.1-201ENST00000519737 1188 ntBASIC15.59■□□□□ 0.09
HPS4Q9NQG7 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 AC138466.3-201ENST00000619983 221 ntBASIC15.59■□□□□ 0.09
HPS4Q9NQG7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.59■□□□□ 0.09
HPS4Q9NQG7 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms