Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX8Q9HC52 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX8Q9HC52 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CBX8Q9HC52 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC16.84■□□□□ 0.29
CBX8Q9HC52 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC16.84■□□□□ 0.29
CBX8Q9HC52 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CBX8Q9HC52 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC16.84■□□□□ 0.29
CBX8Q9HC52 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CBX8Q9HC52 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CBX8Q9HC52 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CBX8Q9HC52 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.84■□□□□ 0.29
CBX8Q9HC52 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC16.84■□□□□ 0.29
CBX8Q9HC52 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CBX8Q9HC52 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.84■□□□□ 0.29
CBX8Q9HC52 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CBX8Q9HC52 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.84■□□□□ 0.29
CBX8Q9HC52 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CBX8Q9HC52 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CBX8Q9HC52 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.84■□□□□ 0.29
CBX8Q9HC52 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CBX8Q9HC52 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.84■□□□□ 0.29
CBX8Q9HC52 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.84■□□□□ 0.29
CBX8Q9HC52 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.84■□□□□ 0.29
CBX8Q9HC52 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.84■□□□□ 0.29
CBX8Q9HC52 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
CBX8Q9HC52 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.84■□□□□ 0.29
CBX8Q9HC52 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.84■□□□□ 0.29
CBX8Q9HC52 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.84■□□□□ 0.29
CBX8Q9HC52 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CBX8Q9HC52 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CBX8Q9HC52 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.84■□□□□ 0.29
CBX8Q9HC52 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.84■□□□□ 0.29
CBX8Q9HC52 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CBX8Q9HC52 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CBX8Q9HC52 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CBX8Q9HC52 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CBX8Q9HC52 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CBX8Q9HC52 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.84■□□□□ 0.29
CBX8Q9HC52 AC027612.1-201ENST00000445234 2395 ntBASIC16.84■□□□□ 0.29
CBX8Q9HC52 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
CBX8Q9HC52 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CBX8Q9HC52 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.83■□□□□ 0.29
CBX8Q9HC52 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.83■□□□□ 0.29
CBX8Q9HC52 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX8Q9HC52 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX8Q9HC52 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CBX8Q9HC52 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX8Q9HC52 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CBX8Q9HC52 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX8Q9HC52 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CBX8Q9HC52 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CBX8Q9HC52 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX8Q9HC52 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.83■□□□□ 0.28
CBX8Q9HC52 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CBX8Q9HC52 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX8Q9HC52 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.83■□□□□ 0.28
CBX8Q9HC52 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.83■□□□□ 0.28
CBX8Q9HC52 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
CBX8Q9HC52 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CBX8Q9HC52 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.83■□□□□ 0.28
CBX8Q9HC52 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CBX8Q9HC52 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CBX8Q9HC52 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC16.83■□□□□ 0.28
CBX8Q9HC52 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.83■□□□□ 0.28
CBX8Q9HC52 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.83■□□□□ 0.28
CBX8Q9HC52 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
CBX8Q9HC52 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.83■□□□□ 0.28
CBX8Q9HC52 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.83■□□□□ 0.28
CBX8Q9HC52 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.83■□□□□ 0.28
CBX8Q9HC52 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CBX8Q9HC52 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX8Q9HC52 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX8Q9HC52 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX8Q9HC52 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CBX8Q9HC52 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX8Q9HC52 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX8Q9HC52 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CBX8Q9HC52 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.82■□□□□ 0.28
CBX8Q9HC52 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 AC023794.5-201ENST00000564380 2157 ntBASIC16.82■□□□□ 0.28
CBX8Q9HC52 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.82■□□□□ 0.28
CBX8Q9HC52 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.82■□□□□ 0.28
CBX8Q9HC52 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.82■□□□□ 0.28
CBX8Q9HC52 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms