Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 AL807761.2-201ENST00000422849 729 ntBASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 IGHV3-37-201ENST00000518544 340 ntBASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
PCDH11XQ9BZA7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 R3HDM2P2-201ENST00000401880 2116 ntBASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 CROCCP1-201ENST00000426910 5675 ntBASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 AC007326.1-201ENST00000604539 458 ntBASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 MRPL37P1-201ENST00000592451 1337 ntBASIC19.2■□□□□ 0.66
PCDH11XQ9BZA7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 AC009093.10-201ENST00000641956 1442 ntBASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 RPL13AP19-201ENST00000434320 584 ntBASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 FTH1P22-201ENST00000456305 520 ntBASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 AC114947.1-202ENST00000514136 344 ntBASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 AL022334.2-201ENST00000610000 484 ntBASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 AC087392.5-201ENST00000612517 489 ntBASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDH11XQ9BZA7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms