Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 APP-205ENST00000358918 2366 ntTSL 5 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 ZNF259P1-201ENST00000407656 1365 ntBASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 LSS-211ENST00000522411 2523 ntTSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 AC007618.1-201ENST00000366455 732 ntBASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 BMS1P13-201ENST00000417301 885 ntBASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 MED15P5-201ENST00000423150 992 ntBASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 MCCD1P2-201ENST00000423228 335 ntBASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 AC092810.1-201ENST00000429208 1224 ntBASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 GPS2P2-201ENST00000430745 888 ntBASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 MTND2P2-201ENST00000434633 945 ntBASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 AC131097.1-201ENST00000437438 739 ntTSL 3 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 RPL13P2-201ENST00000440687 659 ntBASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 BMS1P11-201ENST00000442351 885 ntBASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 BMS1P9-201ENST00000457640 885 ntBASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 UBE2D3-211ENST00000502404 574 ntTSL 4 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 COL6A4P2-205ENST00000509855 506 ntBASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 RNU6-551P-201ENST00000516661 103 ntBASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 AC025419.1-202ENST00000535315 744 ntTSL 3 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 AC093520.2-201ENST00000561830 333 ntBASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 AL049840.6-202ENST00000603373 279 ntBASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 Metazoa_SRP.58-201ENST00000618720 282 ntBASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 AC253576.2-201ENST00000618815 580 ntBASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 AL512324.3-201ENST00000619383 882 ntBASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 AC055717.3-201ENST00000622967 595 ntBASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 AL157414.3-201ENST00000624276 1954 ntBASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 AC016397.2-201ENST00000624848 1985 ntBASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 AL360270.3-201ENST00000609118 1348 ntBASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
KRTAP3-1Q9BYR8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms