Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 UGT1A10-202ENST00000373445 2065 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AP001267.2-201ENST00000532619 2086 ntBASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AC099521.3-201ENST00000624251 2938 ntBASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AL356585.2-201ENST00000625078 2396 ntBASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 PPT1-213ENST00000641319 2388 ntBASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 GOLGA8VP-201ENST00000559009 1798 ntBASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 SLC6A6P1-201ENST00000413933 1850 ntBASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 SNTG1-202ENST00000518864 1925 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms