Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SNX18Q96RF0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.83□□□□□ -0.2
SNX18Q96RF0 AC012508.2-201ENST00000567613 1472 ntBASIC13.83□□□□□ -0.2
SNX18Q96RF0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.83□□□□□ -0.2
SNX18Q96RF0 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNX18Q96RF0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.83□□□□□ -0.2
SNX18Q96RF0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SNX18Q96RF0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNX18Q96RF0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.83□□□□□ -0.2
SNX18Q96RF0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SNX18Q96RF0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
SNX18Q96RF0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.83□□□□□ -0.2
SNX18Q96RF0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.83□□□□□ -0.2
SNX18Q96RF0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.83□□□□□ -0.2
SNX18Q96RF0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SNX18Q96RF0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.83□□□□□ -0.2
SNX18Q96RF0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.83□□□□□ -0.2
SNX18Q96RF0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SNX18Q96RF0 RN7SL618P-201ENST00000477850 296 ntBASIC13.83□□□□□ -0.2
SNX18Q96RF0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SNX18Q96RF0 SDHAP3-202ENST00000515467 728 ntBASIC13.83□□□□□ -0.2
SNX18Q96RF0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNX18Q96RF0 AL158211.3-201ENST00000607385 239 ntBASIC13.83□□□□□ -0.2
SNX18Q96RF0 TEX28P1-201ENST00000613479 1221 ntBASIC13.83□□□□□ -0.2
SNX18Q96RF0 TEX28P2-201ENST00000617764 1221 ntBASIC13.83□□□□□ -0.2
SNX18Q96RF0 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNX18Q96RF0 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNX18Q96RF0 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNX18Q96RF0 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SNX18Q96RF0 AC089987.1-201ENST00000551654 2209 ntBASIC13.83□□□□□ -0.2
SNX18Q96RF0 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
SNX18Q96RF0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SNX18Q96RF0 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SNX18Q96RF0 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.83□□□□□ -0.2
SNX18Q96RF0 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNX18Q96RF0 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNX18Q96RF0 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNX18Q96RF0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.83□□□□□ -0.2
SNX18Q96RF0 AC005562.1-201ENST00000583030 3219 ntBASIC13.83□□□□□ -0.2
SNX18Q96RF0 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNX18Q96RF0 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNX18Q96RF0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNX18Q96RF0 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNX18Q96RF0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNX18Q96RF0 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNX18Q96RF0 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNX18Q96RF0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.82□□□□□ -0.2
SNX18Q96RF0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNX18Q96RF0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 AC236430.1-201ENST00000402231 743 ntBASIC13.82□□□□□ -0.2
SNX18Q96RF0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 TSPY16P-201ENST00000449843 468 ntBASIC13.82□□□□□ -0.2
SNX18Q96RF0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNX18Q96RF0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 AL512361.1-201ENST00000554200 418 ntBASIC13.82□□□□□ -0.2
SNX18Q96RF0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 AC010336.2-201ENST00000564226 506 ntBASIC13.82□□□□□ -0.2
SNX18Q96RF0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNX18Q96RF0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNX18Q96RF0 AC025181.2-201ENST00000606994 802 ntBASIC13.82□□□□□ -0.2
SNX18Q96RF0 SPDYE12P-201ENST00000618416 771 ntBASIC13.82□□□□□ -0.2
SNX18Q96RF0 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNX18Q96RF0 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNX18Q96RF0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNX18Q96RF0 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNX18Q96RF0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SNX18Q96RF0 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNX18Q96RF0 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNX18Q96RF0 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNX18Q96RF0 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.81□□□□□ -0.2
SNX18Q96RF0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SNX18Q96RF0 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNX18Q96RF0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNX18Q96RF0 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SNX18Q96RF0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNX18Q96RF0 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.81□□□□□ -0.2
SNX18Q96RF0 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SNX18Q96RF0 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms