Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 SCN5A-202ENST00000333535 8456 ntAPPRIS P5 TSL 1 (best) BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC11.49□□□□□ -0.57
AP1S3Q96PC3 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 AC004987.2-201ENST00000395959 1148 ntBASIC11.49□□□□□ -0.57
AP1S3Q96PC3 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 UNC93B6-202ENST00000528242 690 ntBASIC11.49□□□□□ -0.57
AP1S3Q96PC3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 AL445228.2-201ENST00000605589 952 ntBASIC11.49□□□□□ -0.57
AP1S3Q96PC3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 AL691432.1-201ENST00000596308 1422 ntBASIC11.49□□□□□ -0.57
AP1S3Q96PC3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 FGD5P1-202ENST00000614866 2498 ntBASIC11.49□□□□□ -0.57
AP1S3Q96PC3 AC018892.3-201ENST00000623986 2499 ntBASIC11.49□□□□□ -0.57
AP1S3Q96PC3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 BNIP3P1-202ENST00000550043 1585 ntBASIC11.49□□□□□ -0.57
AP1S3Q96PC3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 AL359881.3-201ENST00000602640 1721 ntBASIC11.49□□□□□ -0.57
AP1S3Q96PC3 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC11.49□□□□□ -0.57
AP1S3Q96PC3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 ZNF142-201ENST00000411696 5926 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 HNRNPDP1-201ENST00000439535 754 ntBASIC11.48□□□□□ -0.57
AP1S3Q96PC3 AC098859.1-201ENST00000502915 1238 ntBASIC11.48□□□□□ -0.57
AP1S3Q96PC3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 AL450472.2-201ENST00000603663 1156 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms