Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX11Q96FC9 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX11Q96FC9 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.94■□□□□ 0.46
DDX11Q96FC9 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX11Q96FC9 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
DDX11Q96FC9 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DDX11Q96FC9 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.94■□□□□ 0.46
DDX11Q96FC9 AP001063.1-201ENST00000568332 529 ntBASIC17.94■□□□□ 0.46
DDX11Q96FC9 CLUHP6-201ENST00000580789 941 ntBASIC17.94■□□□□ 0.46
DDX11Q96FC9 RN7SL219P-201ENST00000582872 296 ntBASIC17.94■□□□□ 0.46
DDX11Q96FC9 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.94■□□□□ 0.46
DDX11Q96FC9 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.94■□□□□ 0.46
DDX11Q96FC9 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.94■□□□□ 0.46
DDX11Q96FC9 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX11Q96FC9 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX11Q96FC9 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX11Q96FC9 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX11Q96FC9 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX11Q96FC9 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX11Q96FC9 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
DDX11Q96FC9 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX11Q96FC9 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX11Q96FC9 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX11Q96FC9 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX11Q96FC9 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DDX11Q96FC9 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX11Q96FC9 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX11Q96FC9 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX11Q96FC9 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX11Q96FC9 AC015656.1-201ENST00000624209 3578 ntBASIC17.94■□□□□ 0.46
DDX11Q96FC9 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC17.93■□□□□ 0.46
DDX11Q96FC9 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
DDX11Q96FC9 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX11Q96FC9 INTS4P1-203ENST00000641008 3683 ntBASIC17.93■□□□□ 0.46
DDX11Q96FC9 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX11Q96FC9 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDX11Q96FC9 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX11Q96FC9 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDX11Q96FC9 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.93■□□□□ 0.46
DDX11Q96FC9 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.93■□□□□ 0.46
DDX11Q96FC9 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDX11Q96FC9 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.93■□□□□ 0.46
DDX11Q96FC9 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.93■□□□□ 0.46
DDX11Q96FC9 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.93■□□□□ 0.46
DDX11Q96FC9 RPL7P3-201ENST00000441388 714 ntBASIC17.93■□□□□ 0.46
DDX11Q96FC9 CSF2RBP1-201ENST00000447905 391 ntBASIC17.93■□□□□ 0.46
DDX11Q96FC9 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.93■□□□□ 0.46
DDX11Q96FC9 AC093433.1-201ENST00000458048 571 ntBASIC17.93■□□□□ 0.46
DDX11Q96FC9 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
DDX11Q96FC9 AL583810.1-201ENST00000553344 1045 ntBASIC17.93■□□□□ 0.46
DDX11Q96FC9 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.93■□□□□ 0.46
DDX11Q96FC9 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDX11Q96FC9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.93■□□□□ 0.46
DDX11Q96FC9 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX11Q96FC9 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDX11Q96FC9 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX11Q96FC9 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX11Q96FC9 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX11Q96FC9 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.93■□□□□ 0.46
DDX11Q96FC9 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.93■□□□□ 0.46
DDX11Q96FC9 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
DDX11Q96FC9 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX11Q96FC9 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDX11Q96FC9 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.93■□□□□ 0.46
DDX11Q96FC9 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.93■□□□□ 0.46
DDX11Q96FC9 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
DDX11Q96FC9 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
DDX11Q96FC9 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX11Q96FC9 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX11Q96FC9 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX11Q96FC9 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.93■□□□□ 0.46
DDX11Q96FC9 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX11Q96FC9 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DDX11Q96FC9 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
DDX11Q96FC9 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX11Q96FC9 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX11Q96FC9 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DDX11Q96FC9 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.92■□□□□ 0.46
DDX11Q96FC9 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX11Q96FC9 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX11Q96FC9 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX11Q96FC9 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX11Q96FC9 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
DDX11Q96FC9 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX11Q96FC9 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DDX11Q96FC9 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.92■□□□□ 0.46
DDX11Q96FC9 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
DDX11Q96FC9 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DDX11Q96FC9 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
DDX11Q96FC9 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
DDX11Q96FC9 AC099336.1-201ENST00000417053 1171 ntBASIC17.92■□□□□ 0.46
DDX11Q96FC9 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.92■□□□□ 0.46
DDX11Q96FC9 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.92■□□□□ 0.46
DDX11Q96FC9 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.92■□□□□ 0.46
DDX11Q96FC9 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DDX11Q96FC9 AC012441.1-201ENST00000446669 685 ntBASIC17.92■□□□□ 0.46
DDX11Q96FC9 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DDX11Q96FC9 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
DDX11Q96FC9 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.92■□□□□ 0.46
DDX11Q96FC9 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms