Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
NMD3Q96D46 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NMD3Q96D46 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
NMD3Q96D46 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.39□□□□□ -0.11
NMD3Q96D46 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NMD3Q96D46 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
NMD3Q96D46 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.38□□□□□ -0.11
NMD3Q96D46 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NMD3Q96D46 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NMD3Q96D46 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
NMD3Q96D46 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NMD3Q96D46 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.38□□□□□ -0.11
NMD3Q96D46 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NMD3Q96D46 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.38□□□□□ -0.11
NMD3Q96D46 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NMD3Q96D46 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
NMD3Q96D46 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 HTR5BP-201ENST00000430851 1154 ntBASIC14.38□□□□□ -0.11
NMD3Q96D46 SPCS2P4-201ENST00000436160 681 ntBASIC14.38□□□□□ -0.11
NMD3Q96D46 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.38□□□□□ -0.11
NMD3Q96D46 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.38□□□□□ -0.11
NMD3Q96D46 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.38□□□□□ -0.11
NMD3Q96D46 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.38□□□□□ -0.11
NMD3Q96D46 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.38□□□□□ -0.11
NMD3Q96D46 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.38□□□□□ -0.11
NMD3Q96D46 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.38□□□□□ -0.11
NMD3Q96D46 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.38□□□□□ -0.11
NMD3Q96D46 AC061975.2-201ENST00000581722 295 ntBASIC14.38□□□□□ -0.11
NMD3Q96D46 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.38□□□□□ -0.11
NMD3Q96D46 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.38□□□□□ -0.11
NMD3Q96D46 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
NMD3Q96D46 AC026120.1-201ENST00000611536 926 ntBASIC14.38□□□□□ -0.11
NMD3Q96D46 SPTSSB-204ENST00000617024 1292 ntBASIC14.38□□□□□ -0.11
NMD3Q96D46 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.38□□□□□ -0.11
NMD3Q96D46 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NMD3Q96D46 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NMD3Q96D46 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.38□□□□□ -0.11
NMD3Q96D46 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.38□□□□□ -0.11
NMD3Q96D46 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NMD3Q96D46 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.38□□□□□ -0.11
NMD3Q96D46 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NMD3Q96D46 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NMD3Q96D46 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.38□□□□□ -0.11
NMD3Q96D46 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.37□□□□□ -0.11
NMD3Q96D46 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NMD3Q96D46 AL031595.1-201ENST00000623969 4709 ntBASIC14.37□□□□□ -0.11
NMD3Q96D46 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.37□□□□□ -0.11
NMD3Q96D46 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
NMD3Q96D46 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NMD3Q96D46 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NMD3Q96D46 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NMD3Q96D46 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.37□□□□□ -0.11
NMD3Q96D46 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.37□□□□□ -0.11
NMD3Q96D46 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NMD3Q96D46 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NMD3Q96D46 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NMD3Q96D46 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.37□□□□□ -0.11
NMD3Q96D46 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NMD3Q96D46 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NMD3Q96D46 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NMD3Q96D46 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NMD3Q96D46 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.37□□□□□ -0.11
NMD3Q96D46 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.37□□□□□ -0.11
NMD3Q96D46 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NMD3Q96D46 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NMD3Q96D46 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.37□□□□□ -0.11
NMD3Q96D46 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NMD3Q96D46 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.37□□□□□ -0.11
NMD3Q96D46 AC079140.1-201ENST00000508039 487 ntBASIC14.37□□□□□ -0.11
NMD3Q96D46 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.37□□□□□ -0.11
NMD3Q96D46 AP000842.3-202ENST00000569238 1080 ntBASIC14.37□□□□□ -0.11
NMD3Q96D46 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NMD3Q96D46 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.37□□□□□ -0.11
NMD3Q96D46 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
NMD3Q96D46 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms