Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PTP4A1Q93096 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.58□□□□□ -0.24
PTP4A1Q93096 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PTP4A1Q93096 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.58□□□□□ -0.24
PTP4A1Q93096 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PTP4A1Q93096 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PTP4A1Q93096 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PTP4A1Q93096 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.58□□□□□ -0.24
PTP4A1Q93096 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
PTP4A1Q93096 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PTP4A1Q93096 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PTP4A1Q93096 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PTP4A1Q93096 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.58□□□□□ -0.24
PTP4A1Q93096 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.58□□□□□ -0.24
PTP4A1Q93096 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PTP4A1Q93096 TSSK5P-201ENST00000423978 907 ntBASIC13.58□□□□□ -0.24
PTP4A1Q93096 HLA-K-203ENST00000430151 1046 ntBASIC13.58□□□□□ -0.24
PTP4A1Q93096 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PTP4A1Q93096 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.58□□□□□ -0.24
PTP4A1Q93096 AC093214.1-201ENST00000511688 1107 ntBASIC13.58□□□□□ -0.24
PTP4A1Q93096 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.58□□□□□ -0.24
PTP4A1Q93096 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.58□□□□□ -0.24
PTP4A1Q93096 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.58□□□□□ -0.24
PTP4A1Q93096 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.58□□□□□ -0.24
PTP4A1Q93096 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.58□□□□□ -0.24
PTP4A1Q93096 AC027796.2-201ENST00000575326 344 ntBASIC13.58□□□□□ -0.24
PTP4A1Q93096 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
PTP4A1Q93096 BTBD7P1-201ENST00000447253 1453 ntBASIC13.58□□□□□ -0.24
PTP4A1Q93096 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PTP4A1Q93096 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
PTP4A1Q93096 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.58□□□□□ -0.24
PTP4A1Q93096 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PTP4A1Q93096 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
PTP4A1Q93096 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.58□□□□□ -0.24
PTP4A1Q93096 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PTP4A1Q93096 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PTP4A1Q93096 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PTP4A1Q93096 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PTP4A1Q93096 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PTP4A1Q93096 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PTP4A1Q93096 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PTP4A1Q93096 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.58□□□□□ -0.24
PTP4A1Q93096 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
PTP4A1Q93096 DGCR9-201ENST00000609630 2415 ntBASIC13.58□□□□□ -0.24
PTP4A1Q93096 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.58□□□□□ -0.24
PTP4A1Q93096 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.57□□□□□ -0.24
PTP4A1Q93096 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
PTP4A1Q93096 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PTP4A1Q93096 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.57□□□□□ -0.24
PTP4A1Q93096 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.57□□□□□ -0.24
PTP4A1Q93096 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
PTP4A1Q93096 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.57□□□□□ -0.24
PTP4A1Q93096 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.57□□□□□ -0.24
PTP4A1Q93096 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.57□□□□□ -0.24
PTP4A1Q93096 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
PTP4A1Q93096 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.57□□□□□ -0.24
PTP4A1Q93096 AC114501.2-201ENST00000439631 535 ntBASIC13.57□□□□□ -0.24
PTP4A1Q93096 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.57□□□□□ -0.24
PTP4A1Q93096 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
PTP4A1Q93096 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.57□□□□□ -0.24
PTP4A1Q93096 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
PTP4A1Q93096 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.57□□□□□ -0.24
PTP4A1Q93096 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.57□□□□□ -0.24
PTP4A1Q93096 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.57□□□□□ -0.24
PTP4A1Q93096 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
PTP4A1Q93096 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
PTP4A1Q93096 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.57□□□□□ -0.24
PTP4A1Q93096 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.57□□□□□ -0.24
PTP4A1Q93096 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.57□□□□□ -0.24
PTP4A1Q93096 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PTP4A1Q93096 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PTP4A1Q93096 BEND3P1-201ENST00000421591 1944 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms