Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 RN7SL8P-201ENST00000461771 266 ntBASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 AC025181.2-201ENST00000606994 802 ntBASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 AC103691.2-201ENST00000618824 433 ntBASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
U2AF1L4Q8WU68 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 SSR4P1-203ENST00000599569 2260 ntBASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 RPSAP31-201ENST00000416648 895 ntBASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 RNMTL1P1-201ENST00000454103 560 ntBASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 AC012044.1-201ENST00000603431 297 ntBASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.21■□□□□ 0.35
U2AF1L4Q8WU68 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
U2AF1L4Q8WU68 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.21■□□□□ 0.34
U2AF1L4Q8WU68 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
U2AF1L4Q8WU68 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC17.21■□□□□ 0.34
U2AF1L4Q8WU68 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 AL627389.1-201ENST00000413508 1182 ntBASIC17.2■□□□□ 0.34
U2AF1L4Q8WU68 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms