Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 AC104989.1-201ENST00000519711 778 ntBASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 AC068587.6-202ENST00000641839 5619 ntBASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 MIR1202-201ENST00000408529 83 ntBASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 AC131206.1-201ENST00000538078 1211 ntBASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 MIR4259-201ENST00000584466 101 ntBASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 OR10B1P-201ENST00000601666 907 ntBASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
ZIC4Q8N9L1 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZIC4Q8N9L1 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.27□□□□□ -0.28
ZIC4Q8N9L1 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.27□□□□□ -0.28
ZIC4Q8N9L1 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZIC4Q8N9L1 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZIC4Q8N9L1 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.27□□□□□ -0.28
ZIC4Q8N9L1 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZIC4Q8N9L1 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.27□□□□□ -0.28
ZIC4Q8N9L1 AC009093.2-202ENST00000620513 2079 ntBASIC13.27□□□□□ -0.28
ZIC4Q8N9L1 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.27□□□□□ -0.28
ZIC4Q8N9L1 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.27□□□□□ -0.28
ZIC4Q8N9L1 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZIC4Q8N9L1 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.27□□□□□ -0.28
ZIC4Q8N9L1 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 OR8S1-201ENST00000310194 1080 ntBASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
ZIC4Q8N9L1 RN7SKP175-201ENST00000408472 289 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms