Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LTBP4Q8N2S1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LTBP4Q8N2S1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 SPTLC1P3-201ENST00000403408 259 ntBASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 MIR4265-201ENST00000582152 99 ntBASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 RN7SL202P-201ENST00000584410 262 ntBASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 PPY-202ENST00000587006 431 ntTSL 3 BASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 AP001094.4-201ENST00000579008 2176 ntBASIC19.97■□□□□ 0.79
LTBP4Q8N2S1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 CRIP1P2-201ENST00000425396 228 ntBASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LTBP4Q8N2S1 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 AC097474.1-201ENST00000506481 1371 ntBASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTBP4Q8N2S1 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LTBP4Q8N2S1 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LTBP4Q8N2S1 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC19.94■□□□□ 0.78
LTBP4Q8N2S1 AC093300.1-201ENST00000510368 1201 ntBASIC19.94■□□□□ 0.78
LTBP4Q8N2S1 AC100858.1-201ENST00000514059 1228 ntBASIC19.94■□□□□ 0.78
LTBP4Q8N2S1 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC19.94■□□□□ 0.78
LTBP4Q8N2S1 ABCD1P3-201ENST00000562927 605 ntBASIC19.94■□□□□ 0.78
LTBP4Q8N2S1 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC19.94■□□□□ 0.78
LTBP4Q8N2S1 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LTBP4Q8N2S1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LTBP4Q8N2S1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms