Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 AC018442.1-201ENST00000421439 2061 ntBASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 AL390755.1-201ENST00000623716 2027 ntBASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC116Q8IYX3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 RNU1-114P-201ENST00000365297 166 ntBASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 AL139094.1-201ENST00000405549 1188 ntBASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 AC138761.1-201ENST00000584393 385 ntBASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 AC005252.2-201ENST00000624630 1141 ntBASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
CCDC116Q8IYX3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 MTHFR-210ENST00000641407 2387 ntBASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 KLF2P2-201ENST00000416807 1039 ntBASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 CRB3P1-201ENST00000449338 276 ntBASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 AP005019.2-201ENST00000615104 511 ntBASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms