Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 AP006288.1-201ENST00000446065 395 ntBASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 AC079140.1-201ENST00000508039 487 ntBASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 SNHG9-202ENST00000564014 471 ntBASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 AC105021.1-202ENST00000570572 669 ntBASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 AP001160.2-201ENST00000596071 487 ntBASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 AC084121.4-201ENST00000641598 221 ntBASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 AF228730.8-201ENST00000642140 221 ntBASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM42Q8IWZ5 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 AC254562.1-201ENST00000417586 456 ntBASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 AC022447.6-201ENST00000515522 438 ntBASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.13■□□□□ 0.01
TRIM42Q8IWZ5 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms