Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 NOC2LP1-201ENST00000450578 752 ntBASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 AP003419.4-201ENST00000616071 517 ntBASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 POM121L8P-201ENST00000417732 1281 ntBASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 POM121L9P-203ENST00000441984 1285 ntBASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 RN7SL8P-201ENST00000461771 266 ntBASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 RN7SL736P-201ENST00000613111 269 ntBASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 OR2I1P-209ENST00000641730 5365 ntBASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RP1L1Q8IWN7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 AL158070.2-201ENST00000623713 1621 ntBASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 AC007274.2-201ENST00000421675 662 ntBASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 AC079112.1-201ENST00000454972 939 ntBASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 RPL18P13-201ENST00000478088 569 ntBASIC13.67□□□□□ -0.22
RP1L1Q8IWN7 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms