Protein–RNA interactions for Protein: Q8IUF1

CBWD2, COBW domain-containing protein 2, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2Q8IUF1 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CBWD2Q8IUF1 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.33■□□□□ 0.2
CBWD2Q8IUF1 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBWD2Q8IUF1 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CBWD2Q8IUF1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CBWD2Q8IUF1 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBWD2Q8IUF1 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.33■□□□□ 0.2
CBWD2Q8IUF1 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 AL138725.1-201ENST00000407347 1314 ntBASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 SALL4P5-201ENST00000419001 1760 ntBASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 RPL7P3-201ENST00000441388 714 ntBASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 AC234783.1-201ENST00000441761 496 ntBASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 CTBP2P5-201ENST00000454986 1264 ntBASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBWD2Q8IUF1 AL390755.1-201ENST00000623716 2027 ntBASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 LINC00552-201ENST00000625151 2579 ntBASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 AC006001.1-201ENST00000325130 474 ntBASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 AC007969.1-201ENST00000433675 447 ntBASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 AC138696.2-201ENST00000607376 223 ntBASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 MIR6775-201ENST00000617557 69 ntBASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 AC006453.4-201ENST00000636949 1252 ntBASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBWD2Q8IUF1 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBWD2Q8IUF1 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBWD2Q8IUF1 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.3■□□□□ 0.2
CBWD2Q8IUF1 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.3■□□□□ 0.2
CBWD2Q8IUF1 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CBWD2Q8IUF1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBWD2Q8IUF1 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBWD2Q8IUF1 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 205.1 ms