Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 AC089987.1-201ENST00000551654 2209 ntBASIC13.49□□□□□ -0.25
LRRC28Q86X40 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 AC084364.1-201ENST00000551967 1556 ntBASIC13.49□□□□□ -0.25
LRRC28Q86X40 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 CICP20-201ENST00000443330 2801 ntBASIC13.49□□□□□ -0.25
LRRC28Q86X40 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRC28Q86X40 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.48□□□□□ -0.25
LRRC28Q86X40 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.48□□□□□ -0.25
LRRC28Q86X40 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.48□□□□□ -0.25
LRRC28Q86X40 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LRRC28Q86X40 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRC28Q86X40 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRC28Q86X40 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
LRRC28Q86X40 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.48□□□□□ -0.25
LRRC28Q86X40 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.48□□□□□ -0.25
LRRC28Q86X40 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRC28Q86X40 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRC28Q86X40 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRC28Q86X40 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.48□□□□□ -0.25
LRRC28Q86X40 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRC28Q86X40 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LRRC28Q86X40 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.48□□□□□ -0.25
LRRC28Q86X40 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRC28Q86X40 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRC28Q86X40 AL080243.2-201ENST00000418783 582 ntBASIC13.48□□□□□ -0.25
LRRC28Q86X40 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.48□□□□□ -0.25
LRRC28Q86X40 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.48□□□□□ -0.25
LRRC28Q86X40 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.48□□□□□ -0.25
LRRC28Q86X40 TSPY16P-201ENST00000449843 468 ntBASIC13.48□□□□□ -0.25
LRRC28Q86X40 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRC28Q86X40 MIR4745-201ENST00000577608 62 ntBASIC13.48□□□□□ -0.25
LRRC28Q86X40 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.48□□□□□ -0.25
LRRC28Q86X40 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRC28Q86X40 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRC28Q86X40 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
LRRC28Q86X40 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LRRC28Q86X40 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRC28Q86X40 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
LRRC28Q86X40 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LRRC28Q86X40 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.48□□□□□ -0.25
LRRC28Q86X40 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LRRC28Q86X40 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.48□□□□□ -0.25
LRRC28Q86X40 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.48□□□□□ -0.25
LRRC28Q86X40 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRC28Q86X40 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LRRC28Q86X40 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRC28Q86X40 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.48□□□□□ -0.25
LRRC28Q86X40 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.48□□□□□ -0.25
LRRC28Q86X40 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.48□□□□□ -0.25
LRRC28Q86X40 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
LRRC28Q86X40 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LRRC28Q86X40 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.47□□□□□ -0.25
LRRC28Q86X40 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LRRC28Q86X40 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.47□□□□□ -0.25
LRRC28Q86X40 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRC28Q86X40 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.47□□□□□ -0.25
LRRC28Q86X40 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
LRRC28Q86X40 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRC28Q86X40 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
LRRC28Q86X40 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRC28Q86X40 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LRRC28Q86X40 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.47□□□□□ -0.25
LRRC28Q86X40 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.47□□□□□ -0.25
LRRC28Q86X40 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRC28Q86X40 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRC28Q86X40 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
LRRC28Q86X40 AC022144.1-201ENST00000602255 1580 ntBASIC13.47□□□□□ -0.25
LRRC28Q86X40 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.47□□□□□ -0.25
LRRC28Q86X40 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRC28Q86X40 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
LRRC28Q86X40 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.47□□□□□ -0.25
LRRC28Q86X40 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
LRRC28Q86X40 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.47□□□□□ -0.25
LRRC28Q86X40 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LRRC28Q86X40 SERBP1P3-201ENST00000459980 809 ntBASIC13.47□□□□□ -0.25
LRRC28Q86X40 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.47□□□□□ -0.25
LRRC28Q86X40 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.47□□□□□ -0.25
LRRC28Q86X40 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.47□□□□□ -0.25
LRRC28Q86X40 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms