Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 AHCYP2-201ENST00000430630 1300 ntBASIC15.11■□□□□ 0.01
USP45Q70EL2 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
USP45Q70EL2 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
USP45Q70EL2 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
USP45Q70EL2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.11■□□□□ 0.01
USP45Q70EL2 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.11■□□□□ 0.01
USP45Q70EL2 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.11■□□□□ 0.01
USP45Q70EL2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
USP45Q70EL2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.1■□□□□ 0.01
USP45Q70EL2 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
USP45Q70EL2 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP45Q70EL2 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP45Q70EL2 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP45Q70EL2 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
USP45Q70EL2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
USP45Q70EL2 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP45Q70EL2 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP45Q70EL2 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP45Q70EL2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.1■□□□□ 0.01
USP45Q70EL2 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP45Q70EL2 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
USP45Q70EL2 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.1■□□□□ 0.01
USP45Q70EL2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
USP45Q70EL2 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP45Q70EL2 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP45Q70EL2 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.1■□□□□ 0.01
USP45Q70EL2 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP45Q70EL2 MESTP3-201ENST00000503460 968 ntBASIC15.1■□□□□ 0.01
USP45Q70EL2 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.1■□□□□ 0.01
USP45Q70EL2 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.1■□□□□ 0.01
USP45Q70EL2 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP45Q70EL2 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP45Q70EL2 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.1■□□□□ 0.01
USP45Q70EL2 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.1■□□□□ 0.01
USP45Q70EL2 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.1■□□□□ 0.01
USP45Q70EL2 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.1■□□□□ 0.01
USP45Q70EL2 AC004466.1-201ENST00000599515 1080 ntBASIC15.1■□□□□ 0.01
USP45Q70EL2 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.1■□□□□ 0.01
USP45Q70EL2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
USP45Q70EL2 AC138466.3-201ENST00000619983 221 ntBASIC15.1■□□□□ 0.01
USP45Q70EL2 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
USP45Q70EL2 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP45Q70EL2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP45Q70EL2 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP45Q70EL2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.1■□□□□ 0.01
USP45Q70EL2 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
USP45Q70EL2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.1■□□□□ 0.01
USP45Q70EL2 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
USP45Q70EL2 CLUHP2-201ENST00000426660 1303 ntBASIC15.1■□□□□ 0.01
USP45Q70EL2 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP45Q70EL2 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.1■□□□□ 0.01
USP45Q70EL2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP45Q70EL2 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
USP45Q70EL2 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
USP45Q70EL2 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
USP45Q70EL2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.1■□□□□ 0.01
USP45Q70EL2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
USP45Q70EL2 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.1■□□□□ 0.01
USP45Q70EL2 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
USP45Q70EL2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.1■□□□□ 0.01
USP45Q70EL2 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.1■□□□□ 0.01
USP45Q70EL2 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
USP45Q70EL2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.09■□□□□ 0.01
USP45Q70EL2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.09■□□□□ 0.01
USP45Q70EL2 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
USP45Q70EL2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
USP45Q70EL2 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
USP45Q70EL2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
USP45Q70EL2 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
USP45Q70EL2 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
USP45Q70EL2 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
USP45Q70EL2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.09■□□□□ 0.01
USP45Q70EL2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
USP45Q70EL2 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
USP45Q70EL2 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
USP45Q70EL2 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.09■□□□□ 0.01
USP45Q70EL2 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
USP45Q70EL2 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.09■□□□□ 0.01
USP45Q70EL2 FAM8A4P-201ENST00000435433 1213 ntBASIC15.09■□□□□ 0.01
USP45Q70EL2 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.09■□□□□ 0.01
USP45Q70EL2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.09■□□□□ 0.01
USP45Q70EL2 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.09■□□□□ 0.01
USP45Q70EL2 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.09■□□□□ 0.01
USP45Q70EL2 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.09■□□□□ 0.01
USP45Q70EL2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
USP45Q70EL2 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.09■□□□□ 0.01
USP45Q70EL2 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.09■□□□□ 0.01
USP45Q70EL2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
USP45Q70EL2 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
USP45Q70EL2 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
USP45Q70EL2 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
USP45Q70EL2 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
USP45Q70EL2 LINC00528-201ENST00000600723 2160 ntBASIC15.09■□□□□ 0.01
USP45Q70EL2 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
USP45Q70EL2 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
USP45Q70EL2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms