Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13CQ709C8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.18□□□□□ -0.46
VPS13CQ709C8 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13CQ709C8 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.18□□□□□ -0.46
VPS13CQ709C8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13CQ709C8 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
VPS13CQ709C8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
VPS13CQ709C8 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.18□□□□□ -0.46
VPS13CQ709C8 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.18□□□□□ -0.46
VPS13CQ709C8 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13CQ709C8 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
VPS13CQ709C8 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13CQ709C8 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13CQ709C8 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.18□□□□□ -0.46
VPS13CQ709C8 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC12.18□□□□□ -0.46
VPS13CQ709C8 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.18□□□□□ -0.46
VPS13CQ709C8 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13CQ709C8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
VPS13CQ709C8 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
VPS13CQ709C8 AL118508.1-201ENST00000613502 2345 ntBASIC12.18□□□□□ -0.46
VPS13CQ709C8 SALL4P5-201ENST00000419001 1760 ntBASIC12.18□□□□□ -0.46
VPS13CQ709C8 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13CQ709C8 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC12.18□□□□□ -0.46
VPS13CQ709C8 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.18□□□□□ -0.46
VPS13CQ709C8 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13CQ709C8 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC12.18□□□□□ -0.46
VPS13CQ709C8 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13CQ709C8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.18□□□□□ -0.46
VPS13CQ709C8 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13CQ709C8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13CQ709C8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13CQ709C8 PPT1-215ENST00000641471 2368 ntBASIC12.18□□□□□ -0.46
VPS13CQ709C8 AC139712.1-201ENST00000378256 1875 ntBASIC12.18□□□□□ -0.46
VPS13CQ709C8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
VPS13CQ709C8 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13CQ709C8 HNRNPA1P42-201ENST00000458678 957 ntBASIC12.18□□□□□ -0.46
VPS13CQ709C8 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC12.18□□□□□ -0.46
VPS13CQ709C8 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC12.18□□□□□ -0.46
VPS13CQ709C8 MIR3180-2-201ENST00000581748 88 ntBASIC12.18□□□□□ -0.46
VPS13CQ709C8 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.18□□□□□ -0.46
VPS13CQ709C8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 AC063952.3-201ENST00000467756 308 ntBASIC12.17□□□□□ -0.46
VPS13CQ709C8 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 AP005117.1-202ENST00000581724 1908 ntBASIC12.17□□□□□ -0.46
VPS13CQ709C8 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 PYY2-201ENST00000315776 282 ntBASIC12.17□□□□□ -0.46
VPS13CQ709C8 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.17□□□□□ -0.46
VPS13CQ709C8 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13CQ709C8 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13CQ709C8 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
VPS13CQ709C8 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13CQ709C8 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13CQ709C8 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13CQ709C8 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.16□□□□□ -0.46
VPS13CQ709C8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
VPS13CQ709C8 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13CQ709C8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC12.16□□□□□ -0.46
VPS13CQ709C8 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms