Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 FTH1P22-201ENST00000456305 520 ntBASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 AC009560.1-201ENST00000620208 434 ntBASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CNKSR3Q6P9H4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CNKSR3Q6P9H4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CNKSR3Q6P9H4 PCDHB19P-201ENST00000570871 2371 ntBASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 AP003398.1-201ENST00000531124 318 ntBASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 MIR6756-201ENST00000616240 63 ntBASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 AL161773.1-201ENST00000624845 863 ntBASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 AL132780.4-201ENST00000624870 1135 ntBASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CNKSR3Q6P9H4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 AL157792.1-201ENST00000488281 530 ntBASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 AC025262.2-201ENST00000623975 1056 ntBASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 PRORSD1P-202ENST00000563365 2154 ntBASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms