Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 LINC00265-2P-201ENST00000413372 782 ntBASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
VPS13DQ5THJ4 DUX4L50-201ENST00000455245 715 ntBASIC9.77□□□□□ -0.84
VPS13DQ5THJ4 TRMT112P3-201ENST00000580149 358 ntBASIC9.77□□□□□ -0.84
VPS13DQ5THJ4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC9.77□□□□□ -0.84
VPS13DQ5THJ4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
VPS13DQ5THJ4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
VPS13DQ5THJ4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
VPS13DQ5THJ4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.84
VPS13DQ5THJ4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC9.77□□□□□ -0.84
VPS13DQ5THJ4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
VPS13DQ5THJ4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
VPS13DQ5THJ4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
VPS13DQ5THJ4 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC9.77□□□□□ -0.84
VPS13DQ5THJ4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 PPP1R2P4-201ENST00000424051 595 ntBASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 AC091769.1-201ENST00000619576 568 ntBASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 ACTG1P19-201ENST00000418987 1116 ntBASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 RPL18AP8-201ENST00000486071 528 ntBASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 KLF17P1-201ENST00000547105 1126 ntBASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 KRT8P43-201ENST00000406052 1458 ntBASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 AC007326.1-201ENST00000604539 458 ntBASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13DQ5THJ4 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 KRT8P2-201ENST00000556193 944 ntBASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 AL118522.1-201ENST00000611368 560 ntBASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 AC090386.2-201ENST00000623010 1039 ntBASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 AC106827.1-201ENST00000366454 431 ntBASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 KRT8P18-201ENST00000413425 1445 ntBASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 PEBP1P2-201ENST00000603980 558 ntBASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC9.76□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms