Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 AP006294.1-201ENST00000415407 339 ntBASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 AC134915.1-201ENST00000426461 574 ntBASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 INE1-201ENST00000456273 945 ntBASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 REXO1L2P-201ENST00000425429 2069 ntBASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 AC097359.2-201ENST00000604992 2389 ntBASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 NME2P1-201ENST00000426182 414 ntBASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 IGHV3-72-202ENST00000621503 303 ntBASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 PTENP1-202ENST00000532280 3996 ntBASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 INTS4P1-203ENST00000641008 3683 ntBASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms