Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 AC098935.1-201ENST00000446057 611 ntBASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 NOC2LP1-201ENST00000450578 752 ntBASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 RN7SL258P-201ENST00000478664 300 ntBASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 POU5F1P2-201ENST00000521750 823 ntBASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 NPM1P43-201ENST00000558669 786 ntBASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 AC007718.1-201ENST00000621078 280 ntBASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 CICP6-201ENST00000457191 2729 ntBASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 PCDHA1-201ENST00000378133 2726 ntBASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 AL109837.1-201ENST00000603272 613 ntBASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 YRDCP1-201ENST00000621419 643 ntBASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 AC011491.1-203ENST00000637688 543 ntBASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 ZBED1P1-201ENST00000502364 1930 ntBASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM71Q2Q1W2 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 AC007292.2-201ENST00000593524 1812 ntBASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms