Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 AC005229.1-201ENST00000392885 409 ntBASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 RN7SL692P-201ENST00000464677 288 ntBASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 AC025279.2-201ENST00000569730 653 ntBASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 MIR3197-201ENST00000582241 73 ntBASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 AC117489.1-201ENST00000625169 3217 ntBASIC12.98□□□□□ -0.33
RSPO1Q2MKA7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 TMEM14DP-201ENST00000422205 345 ntBASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 AC011495.1-201ENST00000498085 584 ntBASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 AL391280.1-201ENST00000506969 1062 ntBASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 GCOM2-201ENST00000509133 1104 ntBASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 AC022447.6-201ENST00000515522 438 ntBASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 AC008735.3-201ENST00000596646 500 ntBASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 IGHV3-72-202ENST00000621503 303 ntBASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 NORAD-201ENST00000565493 5339 ntBASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
RSPO1Q2MKA7 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RSPO1Q2MKA7 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.96□□□□□ -0.33
RSPO1Q2MKA7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RSPO1Q2MKA7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RSPO1Q2MKA7 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms