Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 HNRNPA1P42-201ENST00000458678 957 ntBASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 EMC4-208ENST00000559078 599 ntTSL 3 BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 MIR4313-201ENST00000580760 101 ntBASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 ME2P1-201ENST00000426028 1970 ntBASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 LINC01815-202ENST00000641468 1409 ntBASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 AL135901.1-201ENST00000451812 333 ntBASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 RN7SL494P-201ENST00000461517 304 ntBASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 LINC01165-201ENST00000445190 1623 ntBASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.43□□□□□ -0.1
RSPO4Q2I0M5 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms