Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.98■□□□□ 0.31
CCNA1P78396 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCNA1P78396 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCNA1P78396 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCNA1P78396 ZBED1P1-201ENST00000502364 1930 ntBASIC16.98■□□□□ 0.31
CCNA1P78396 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CCNA1P78396 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CCNA1P78396 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCNA1P78396 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCNA1P78396 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCNA1P78396 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCNA1P78396 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.98■□□□□ 0.31
CCNA1P78396 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCNA1P78396 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.98■□□□□ 0.31
CCNA1P78396 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CCNA1P78396 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CCNA1P78396 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.98■□□□□ 0.31
CCNA1P78396 AL805961.1-201ENST00000642026 753 ntBASIC16.98■□□□□ 0.31
CCNA1P78396 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCNA1P78396 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCNA1P78396 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
CCNA1P78396 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCNA1P78396 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCNA1P78396 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCNA1P78396 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCNA1P78396 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCNA1P78396 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNA1P78396 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNA1P78396 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCNA1P78396 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNA1P78396 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNA1P78396 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.97■□□□□ 0.31
CCNA1P78396 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
CCNA1P78396 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNA1P78396 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNA1P78396 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.97■□□□□ 0.31
CCNA1P78396 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNA1P78396 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCNA1P78396 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.97■□□□□ 0.31
CCNA1P78396 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.97■□□□□ 0.31
CCNA1P78396 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCNA1P78396 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.97■□□□□ 0.31
CCNA1P78396 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNA1P78396 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCNA1P78396 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.97■□□□□ 0.31
CCNA1P78396 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.97■□□□□ 0.31
CCNA1P78396 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.97■□□□□ 0.31
CCNA1P78396 AC006122.1-201ENST00000493323 440 ntBASIC16.97■□□□□ 0.31
CCNA1P78396 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.97■□□□□ 0.31
CCNA1P78396 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.97■□□□□ 0.31
CCNA1P78396 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.97■□□□□ 0.31
CCNA1P78396 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.97■□□□□ 0.31
CCNA1P78396 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.97■□□□□ 0.31
CCNA1P78396 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.97■□□□□ 0.31
CCNA1P78396 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.97■□□□□ 0.31
CCNA1P78396 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.97■□□□□ 0.31
CCNA1P78396 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.97■□□□□ 0.31
CCNA1P78396 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.97■□□□□ 0.31
CCNA1P78396 AL157813.1-201ENST00000612996 587 ntBASIC16.97■□□□□ 0.31
CCNA1P78396 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.97■□□□□ 0.31
CCNA1P78396 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.97■□□□□ 0.31
CCNA1P78396 AC133540.1-201ENST00000620845 1019 ntBASIC16.97■□□□□ 0.31
CCNA1P78396 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.97■□□□□ 0.31
CCNA1P78396 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNA1P78396 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNA1P78396 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CCNA1P78396 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCNA1P78396 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.97■□□□□ 0.31
CCNA1P78396 AC092850.2-201ENST00000623821 2697 ntBASIC16.97■□□□□ 0.31
CCNA1P78396 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNA1P78396 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNA1P78396 AC144522.1-201ENST00000625111 1658 ntBASIC16.97■□□□□ 0.31
CCNA1P78396 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.97■□□□□ 0.31
CCNA1P78396 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNA1P78396 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNA1P78396 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.97■□□□□ 0.31
CCNA1P78396 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCNA1P78396 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCNA1P78396 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNA1P78396 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CCNA1P78396 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCNA1P78396 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCNA1P78396 FRMPD2B-201ENST00000431305 1347 ntBASIC16.96■□□□□ 0.31
CCNA1P78396 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCNA1P78396 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCNA1P78396 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCNA1P78396 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCNA1P78396 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCNA1P78396 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.96■□□□□ 0.31
CCNA1P78396 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCNA1P78396 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCNA1P78396 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.96■□□□□ 0.31
CCNA1P78396 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCNA1P78396 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCNA1P78396 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.96■□□□□ 0.31
CCNA1P78396 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.96■□□□□ 0.31
CCNA1P78396 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.96■□□□□ 0.31
CCNA1P78396 AL592076.1-201ENST00000424448 303 ntBASIC16.96■□□□□ 0.31
CCNA1P78396 AC026320.2-201ENST00000434379 478 ntBASIC16.96■□□□□ 0.31
CCNA1P78396 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms