Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H6P61129 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC19.82■□□□□ 0.76
ZC3H6P61129 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ZC3H6P61129 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ZC3H6P61129 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ZC3H6P61129 AC105137.3-201ENST00000617588 984 ntBASIC19.82■□□□□ 0.76
ZC3H6P61129 AC009560.1-201ENST00000620208 434 ntBASIC19.82■□□□□ 0.76
ZC3H6P61129 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC19.82■□□□□ 0.76
ZC3H6P61129 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H6P61129 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H6P61129 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H6P61129 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H6P61129 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H6P61129 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ZC3H6P61129 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H6P61129 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ZC3H6P61129 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H6P61129 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H6P61129 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H6P61129 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H6P61129 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.81■□□□□ 0.76
ZC3H6P61129 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H6P61129 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC19.81■□□□□ 0.76
ZC3H6P61129 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H6P61129 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H6P61129 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.81■□□□□ 0.76
ZC3H6P61129 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H6P61129 NME2-201ENST00000393183 568 ntTSL 2 BASIC19.81■□□□□ 0.76
ZC3H6P61129 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H6P61129 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC19.81■□□□□ 0.76
ZC3H6P61129 LYPLA2P1-203ENST00000447689 696 ntBASIC19.81■□□□□ 0.76
ZC3H6P61129 FTH1P22-201ENST00000456305 520 ntBASIC19.81■□□□□ 0.76
ZC3H6P61129 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ZC3H6P61129 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
ZC3H6P61129 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H6P61129 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC19.81■□□□□ 0.76
ZC3H6P61129 CMC2-224ENST00000630396 481 ntTSL 5 BASIC19.81■□□□□ 0.76
ZC3H6P61129 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.81■□□□□ 0.76
ZC3H6P61129 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H6P61129 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.81■□□□□ 0.76
ZC3H6P61129 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H6P61129 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H6P61129 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H6P61129 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.81■□□□□ 0.76
ZC3H6P61129 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.81■□□□□ 0.76
ZC3H6P61129 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H6P61129 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H6P61129 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H6P61129 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H6P61129 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H6P61129 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.8■□□□□ 0.76
ZC3H6P61129 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC19.8■□□□□ 0.76
ZC3H6P61129 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.8■□□□□ 0.76
ZC3H6P61129 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H6P61129 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H6P61129 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H6P61129 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H6P61129 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ZC3H6P61129 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ZC3H6P61129 AL513523.2-202ENST00000427283 2040 ntBASIC19.8■□□□□ 0.76
ZC3H6P61129 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H6P61129 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H6P61129 KRT8P31-201ENST00000504812 1408 ntBASIC19.8■□□□□ 0.76
ZC3H6P61129 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC19.8■□□□□ 0.76
ZC3H6P61129 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H6P61129 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ZC3H6P61129 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC19.8■□□□□ 0.76
ZC3H6P61129 PPOX-204ENST00000462866 473 ntTSL 5 BASIC19.8■□□□□ 0.76
ZC3H6P61129 AC010234.1-201ENST00000494599 870 ntBASIC19.8■□□□□ 0.76
ZC3H6P61129 AC131206.1-201ENST00000538078 1211 ntBASIC19.8■□□□□ 0.76
ZC3H6P61129 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC19.8■□□□□ 0.76
ZC3H6P61129 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC19.8■□□□□ 0.76
ZC3H6P61129 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC19.8■□□□□ 0.76
ZC3H6P61129 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.8■□□□□ 0.76
ZC3H6P61129 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.8■□□□□ 0.76
ZC3H6P61129 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H6P61129 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ZC3H6P61129 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H6P61129 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H6P61129 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H6P61129 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H6P61129 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H6P61129 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ZC3H6P61129 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H6P61129 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.79■□□□□ 0.76
ZC3H6P61129 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H6P61129 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H6P61129 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.79■□□□□ 0.76
ZC3H6P61129 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ZC3H6P61129 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H6P61129 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H6P61129 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H6P61129 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC19.79■□□□□ 0.76
ZC3H6P61129 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H6P61129 AC026410.1-201ENST00000507366 1101 ntBASIC19.79■□□□□ 0.76
ZC3H6P61129 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC19.79■□□□□ 0.76
ZC3H6P61129 VPS18-202ENST00000558474 873 ntTSL 3 BASIC19.79■□□□□ 0.76
ZC3H6P61129 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H6P61129 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC19.79■□□□□ 0.76
ZC3H6P61129 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms