Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDL3P58872 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
RHBDL3P58872 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RHBDL3P58872 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDL3P58872 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDL3P58872 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RHBDL3P58872 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDL3P58872 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
RHBDL3P58872 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDL3P58872 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.56■□□□□ 0.4
RHBDL3P58872 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDL3P58872 KRT18P36-201ENST00000411618 1276 ntBASIC17.56■□□□□ 0.4
RHBDL3P58872 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.56■□□□□ 0.4
RHBDL3P58872 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.56■□□□□ 0.4
RHBDL3P58872 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDL3P58872 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.56■□□□□ 0.4
RHBDL3P58872 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.56■□□□□ 0.4
RHBDL3P58872 AC242376.1-201ENST00000559033 726 ntBASIC17.56■□□□□ 0.4
RHBDL3P58872 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.56■□□□□ 0.4
RHBDL3P58872 MIR4754-201ENST00000582477 89 ntBASIC17.56■□□□□ 0.4
RHBDL3P58872 AC133540.1-201ENST00000620845 1019 ntBASIC17.56■□□□□ 0.4
RHBDL3P58872 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDL3P58872 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.56■□□□□ 0.4
RHBDL3P58872 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.56■□□□□ 0.4
RHBDL3P58872 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RHBDL3P58872 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.56■□□□□ 0.4
RHBDL3P58872 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDL3P58872 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDL3P58872 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RHBDL3P58872 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.56■□□□□ 0.4
RHBDL3P58872 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDL3P58872 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.56■□□□□ 0.4
RHBDL3P58872 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.56■□□□□ 0.4
RHBDL3P58872 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RHBDL3P58872 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.56■□□□□ 0.4
RHBDL3P58872 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RHBDL3P58872 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDL3P58872 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.55■□□□□ 0.4
RHBDL3P58872 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
RHBDL3P58872 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RHBDL3P58872 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDL3P58872 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
RHBDL3P58872 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RHBDL3P58872 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDL3P58872 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDL3P58872 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDL3P58872 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDL3P58872 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.55■□□□□ 0.4
RHBDL3P58872 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDL3P58872 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDL3P58872 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.55■□□□□ 0.4
RHBDL3P58872 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDL3P58872 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.55■□□□□ 0.4
RHBDL3P58872 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDL3P58872 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.55■□□□□ 0.4
RHBDL3P58872 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.55■□□□□ 0.4
RHBDL3P58872 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.55■□□□□ 0.4
RHBDL3P58872 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDL3P58872 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.55■□□□□ 0.4
RHBDL3P58872 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.55■□□□□ 0.4
RHBDL3P58872 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDL3P58872 RN7SL190P-201ENST00000582519 257 ntBASIC17.55■□□□□ 0.4
RHBDL3P58872 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.55■□□□□ 0.4
RHBDL3P58872 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.55■□□□□ 0.4
RHBDL3P58872 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDL3P58872 AC092135.3-201ENST00000624151 1846 ntBASIC17.55■□□□□ 0.4
RHBDL3P58872 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDL3P58872 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDL3P58872 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDL3P58872 KRT8P21-201ENST00000430398 1491 ntBASIC17.55■□□□□ 0.4
RHBDL3P58872 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.55■□□□□ 0.4
RHBDL3P58872 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RHBDL3P58872 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDL3P58872 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RHBDL3P58872 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDL3P58872 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
RHBDL3P58872 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDL3P58872 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.55■□□□□ 0.4
RHBDL3P58872 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDL3P58872 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDL3P58872 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RHBDL3P58872 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RHBDL3P58872 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RHBDL3P58872 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RHBDL3P58872 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RHBDL3P58872 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RHBDL3P58872 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RHBDL3P58872 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RHBDL3P58872 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RHBDL3P58872 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RHBDL3P58872 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RHBDL3P58872 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RHBDL3P58872 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RHBDL3P58872 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RHBDL3P58872 AC239868.1-201ENST00000369385 493 ntBASIC17.54■□□□□ 0.4
RHBDL3P58872 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RHBDL3P58872 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RHBDL3P58872 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.54■□□□□ 0.4
RHBDL3P58872 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.54■□□□□ 0.4
RHBDL3P58872 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms