Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 CICP20-201ENST00000443330 2801 ntBASIC13.16□□□□□ -0.3
ATP1B3P54709 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.16□□□□□ -0.3
ATP1B3P54709 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
ATP1B3P54709 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.16□□□□□ -0.3
ATP1B3P54709 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.16□□□□□ -0.3
ATP1B3P54709 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.16□□□□□ -0.3
ATP1B3P54709 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.16□□□□□ -0.3
ATP1B3P54709 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.16□□□□□ -0.3
ATP1B3P54709 AC000095.1-201ENST00000603208 874 ntBASIC13.16□□□□□ -0.3
ATP1B3P54709 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.16□□□□□ -0.3
ATP1B3P54709 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.16□□□□□ -0.3
ATP1B3P54709 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
ATP1B3P54709 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
ATP1B3P54709 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ATP1B3P54709 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.16□□□□□ -0.3
ATP1B3P54709 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.16□□□□□ -0.3
ATP1B3P54709 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.16□□□□□ -0.3
ATP1B3P54709 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.16□□□□□ -0.3
ATP1B3P54709 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
ATP1B3P54709 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.15□□□□□ -0.3
ATP1B3P54709 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.15□□□□□ -0.3
ATP1B3P54709 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.15□□□□□ -0.3
ATP1B3P54709 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATP1B3P54709 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ATP1B3P54709 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ATP1B3P54709 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATP1B3P54709 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATP1B3P54709 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ATP1B3P54709 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ATP1B3P54709 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATP1B3P54709 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ATP1B3P54709 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATP1B3P54709 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ATP1B3P54709 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ATP1B3P54709 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.15□□□□□ -0.3
ATP1B3P54709 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.15□□□□□ -0.3
ATP1B3P54709 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.15□□□□□ -0.3
ATP1B3P54709 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.15□□□□□ -0.3
ATP1B3P54709 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.15□□□□□ -0.3
ATP1B3P54709 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATP1B3P54709 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.15□□□□□ -0.3
ATP1B3P54709 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.15□□□□□ -0.3
ATP1B3P54709 AC004066.1-201ENST00000502488 802 ntBASIC13.15□□□□□ -0.3
ATP1B3P54709 AC097493.3-201ENST00000509725 367 ntBASIC13.15□□□□□ -0.3
ATP1B3P54709 IGHV3-42-201ENST00000520410 361 ntBASIC13.15□□□□□ -0.3
ATP1B3P54709 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.15□□□□□ -0.3
ATP1B3P54709 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.15□□□□□ -0.3
ATP1B3P54709 SAMD11P1-201ENST00000571429 661 ntBASIC13.15□□□□□ -0.3
ATP1B3P54709 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.15□□□□□ -0.3
ATP1B3P54709 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.15□□□□□ -0.3
ATP1B3P54709 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.15□□□□□ -0.3
ATP1B3P54709 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.15□□□□□ -0.3
ATP1B3P54709 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
ATP1B3P54709 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.15□□□□□ -0.3
ATP1B3P54709 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.15□□□□□ -0.3
ATP1B3P54709 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATP1B3P54709 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ATP1B3P54709 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATP1B3P54709 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.15□□□□□ -0.3
ATP1B3P54709 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.15□□□□□ -0.3
ATP1B3P54709 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATP1B3P54709 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.15□□□□□ -0.3
ATP1B3P54709 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.15□□□□□ -0.3
ATP1B3P54709 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.15□□□□□ -0.3
ATP1B3P54709 AC007787.1-201ENST00000588095 1583 ntBASIC13.15□□□□□ -0.3
ATP1B3P54709 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ATP1B3P54709 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
ATP1B3P54709 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.15□□□□□ -0.31
ATP1B3P54709 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.14□□□□□ -0.31
ATP1B3P54709 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 AC100757.3-201ENST00000622361 1406 ntBASIC13.14□□□□□ -0.31
ATP1B3P54709 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ATP1B3P54709 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
ATP1B3P54709 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
ATP1B3P54709 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.14□□□□□ -0.31
ATP1B3P54709 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATP1B3P54709 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.14□□□□□ -0.31
ATP1B3P54709 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.14□□□□□ -0.31
ATP1B3P54709 HSPA7-201ENST00000445535 1927 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms